PONS AND MEDULLA - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:133.8 nTPM
HPA:133.8 nTPM
FANTOM5:261.9 Scaled Tags Per Million
Pig:61.7 nTPM
Mouse:111.9 nTPM
Allen mouse:1.5 Expression energy

PONS AND MEDULLA - Annotated protein expression
Pending normal tissue analysis

PONS AND MEDULLA - HPA Brain RNA-seq
Max nTPM 133.8
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 113.7
2301 Female, age 85, both hemispheres 126.0
2090 Male, age 80, both hemispheres 120.5
2188 Female, age 91, both hemispheres 114.7
1984 Male, age 76, both hemispheres 93.4
Area postrema
nTPM: 94.3
2306 Male, age 80, both hemispheres 111.4
2799 Male, age 61, both hemispheres 97.2
2054 Male, age 76, both hemispheres 74.3
Cuneate nuclei
nTPM: 115.2
2381 Male, age 80, both hemispheres 120.2
2376 Male, age 61, both hemispheres 113.7
2131 Male, age 76, both hemispheres 111.8
Dorsal cochlear nucleus
nTPM: 107.3
2802 Male, age 74, right hemisphere 117.3
2378 Male, age 80, both hemispheres 111.6
2187 Female, age 91, both hemispheres 110.2
2058 Male, age 76, both hemispheres 102.2
2370 Male, age 61, both hemispheres 95.1
Dorsal medullary reticular nucleus
nTPM: 97.7
2373 Male, age 61, both hemispheres 98.5
2088 Male, age 76, both hemispheres 98.4
2040 Female, age 85, both hemispheres 96.3
Dorsal motor vagal complex
nTPM: 86.6
2797 Male, age 61, both hemispheres 126.3
2185 Male, age 76, both hemispheres 107.8
2844 Male, age 55, unknown 80.7
2000 Male, age 74, unknown 80.5
2133 Female, age 91, both hemispheres 76.7
2807 Female, age 85, both hemispheres 76.0
2643 Male, age 74, both hemispheres 74.3
2813 Female, age 72, unknown 70.7
Dorsal tegmental nucleus
nTPM: 91.4
2083 Male, age 80, both hemispheres 107.7
1936 Male, age 76, left hemisphere 98.5
2326 Male, age 74, both hemispheres 97.5
2358 Male, age 61, both hemispheres 61.8
Dorsolateral tegmental area
nTPM: 92.2
2751 Female, age 85, both hemispheres 127.2
2654 Male, age 80, both hemispheres 104.9
2337 Male, age 61, both hemispheres 77.5
2141 Male, age 76, both hemispheres 76.0
2360 Male, age 74, both hemispheres 75.4
Gigantocellular reticular nuclei, medullary
nTPM: 99.7
2314 Male, age 61, both hemispheres 136.7
2387 Female, age 91, both hemispheres 109.6
1876 Female, age 85, both hemispheres 108.8
2310 Male, age 80, both hemispheres 90.2
2022 Male, age 76, right hemisphere 84.6
2462 Male, age 74, both hemispheres 68.1
Gigantocellular reticular nuclei, pars
nTPM: 93.0
2336 Male, age 61, both hemispheres 95.9
2330 Male, age 80, both hemispheres 95.3
2706 Male, age 80, both hemispheres 93.2
2084 Female, age 85, both hemispheres 92.9
2168 Male, age 76, both hemispheres 87.8
Inferior olive
nTPM: 113.3
2178 Male, age 61, both hemispheres 123.2
2085 Female, age 85, both hemispheres 118.4
2379 Male, age 80, both hemispheres 116.0
2563 Male, age 74, both hemispheres 109.9
2628 Female, age 91, both hemispheres 99.0
Kolliker-Fuse nucleus
nTPM: 96.6
2793 Female, age 91, left hemisphere 106.7
2163 Male, age 80, both hemispheres 98.2
2315 Male, age 76, right hemisphere 84.8
Lateral lemniscal nuclei
nTPM: 92.8
2320 Female, age 91, left hemisphere 101.1
2036 Male, age 80, both hemispheres 97.2
2169 Male, age 76, both hemispheres 94.5
2746 Female, age 85, left hemisphere 91.7
2453 Male, age 74, right hemisphere 79.5
Lateral medullary reticular nucleus
nTPM: 109.6
2852 Male, age 80, both hemispheres 129.2
2374 Male, age 61, both hemispheres 110.7
2190 Female, age 85, both hemispheres 110.2
2305 Male, age 74, both hemispheres 107.7
2804 Female, age 91, both hemispheres 101.0
2044 Male, age 76, both hemispheres 98.5
Lateral parabrachial nucleus
nTPM: 96.6
2792 Male, age 76, both hemispheres 119.2
2013 Male, age 80, both hemispheres 100.4
2139 Female, age 85, right hemisphere 85.4
2790 Male, age 61, both hemispheres 81.5
Lateral vestibular nucleus
nTPM: 109.3
2311 Male, age 80, both hemispheres 114.5
2184 Male, age 76, both hemispheres 104.1
Locus coeruleus
nTPM: 83.2
2014 Male, age 55, unknown 97.0
2317 Female, age 72, unknown 85.5
2162 Male, age 80, both hemispheres 84.2
1980 Male, age 76, both hemispheres 82.6
2720 Male, age 74, both hemispheres 79.4
2788 Male, age 74, unknown 78.8
2123 Female, age 91, both hemispheres 74.8
Medial olivary nucleus
nTPM: 123.1
1962 Male, age 76, both hemispheres 142.3
1943 Male, age 61, both hemispheres 129.9
2138 Female, age 91, both hemispheres 118.1
2851 Male, age 80, both hemispheres 102.1
Medial parabrachial nucleus
nTPM: 101.5
2170 Female, age 91, both hemispheres 120.5
2463 Female, age 85, right hemisphere 113.9
2854 Male, age 80, both hemispheres 98.4
2786 Male, age 76, both hemispheres 94.9
2156 Male, age 61, both hemispheres 80.1
Medial periolivary nuclei
nTPM: 93.0
2081 Male, age 80, both hemispheres 109.0
2063 Male, age 76, both hemispheres 95.5
2458 Female, age 91, both hemispheres 94.9
2791 Male, age 74, right hemisphere 88.9
2171 Female, age 85, both hemispheres 76.5
Medial vestibular nucleus
nTPM: 99.1
2093 Male, age 80, both hemispheres 111.1
2801 Male, age 74, both hemispheres 108.2
2803 Female, age 91, both hemispheres 102.9
2743 Female, age 85, both hemispheres 93.7
2624 Male, age 61, both hemispheres 93.0
2134 Male, age 76, both hemispheres 86.0
Motor facial nucleus
nTPM: 93.5
2126 Male, age 61, both hemispheres 115.0
2062 Male, age 76, both hemispheres 95.3
2795 Female, age 91, both hemispheres 92.3
2697 Female, age 85, both hemispheres 90.7
2365 Male, age 74, right hemisphere 87.8
2327 Male, age 80, both hemispheres 79.6
Motor hypoglossal nucleus
nTPM: 93.3
2182 Male, age 80, both hemispheres 109.3
2125 Female, age 91, both hemispheres 109.0
2132 Female, age 85, both hemispheres 103.5
2461 Male, age 61, both hemispheres 82.3
2277 Male, age 76, both hemispheres 62.4
Motor trigeminal nucleus
nTPM: 90.8
2321 Female, age 91, both hemispheres 98.4
2309 Male, age 76, both hemispheres 96.9
2560 Male, age 74, both hemispheres 89.7
2079 Male, age 80, both hemispheres 88.3
2335 Male, age 61, both hemispheres 80.6
Nuclei of the trapezoid body
nTPM: 88.6
2166 Male, age 80, both hemispheres 100.6
2368 Female, age 91, both hemispheres 95.5
1983 Male, age 76, both hemispheres 90.7
2159 Male, age 61, both hemispheres 84.9
2735 Female, age 85, both hemispheres 71.2
Nucleus ambiguus
nTPM: 112.5
2071 Male, age 76, both hemispheres 142.4
2096 Female, age 85, both hemispheres 82.6
Nucleus cuneatus
nTPM: 115.7
2380 Male, age 80, both hemispheres 136.2
2100 Male, age 76, both hemispheres 132.4
2808 Female, age 85, both hemispheres 121.9
2564 Male, age 74, both hemispheres 103.6
2562 Male, age 61, both hemispheres 100.2
2805 Female, age 91, both hemispheres 100.1
Nucleus gracilis
nTPM: 111.2
2382 Male, age 80, both hemispheres 131.2
2299 Female, age 85, both hemispheres 105.7
2627 Male, age 74, both hemispheres 96.7
Nucleus raphe magnus
nTPM: 82.3
2051 Male, age 76, both hemispheres 96.8
2459 Female, age 91, both hemispheres 96.6
2328 Male, age 80, both hemispheres 92.2
2455 Male, age 74, both hemispheres 78.8
2160 Male, age 61, both hemispheres 67.4
2172 Female, age 85, both hemispheres 61.9
Nucleus raphe obscurus
nTPM: 133.8
2845 Female, age 85, midline 144.7
2142 Male, age 76, midline 140.6
2800 Male, age 61, midline 116.1
Nucleus raphe pallidus
nTPM: 118.1
2145 Male, age 76, midline 146.3
1924 Male, age 61, midline 106.3
2183 Male, age 80, midline 101.7
Nucleus tractus solitarii
nTPM: 70.7
2144 Female, age 91, right hemisphere 80.7
2656 Male, age 76, both hemispheres 70.9
2191 Female, age 85, both hemispheres 67.7
2307 Male, age 80, both hemispheres 63.7
Paramedian reticular nucleus
nTPM: 98.3
2057 Male, age 80, both hemispheres 109.9
2052 Male, age 76, both hemispheres 107.5
2050 Female, age 85, both hemispheres 93.1
2313 Male, age 61, both hemispheres 82.8
Parvicellular reticular nuclei
nTPM: 101.2
2095 Male, age 76, both hemispheres 119.3
2119 Male, age 80, both hemispheres 112.7
2558 Male, age 74, both hemispheres 71.8
Parvicellular reticular nuclei, medullary
nTPM: 94.0
2091 Female, age 85, both hemispheres 97.3
2189 Female, age 91, both hemispheres 94.1
2181 Male, age 80, left hemisphere 90.7
Peritrigeminal nucleus
nTPM: 107.4
2136 Male, age 76, both hemispheres 113.7
2067 Female, age 85, both hemispheres 109.1
2179 Male, age 61, both hemispheres 99.3
Pontine nuclei
nTPM: 93.1
2319 Female, age 91, both hemispheres 107.8
2454 Male, age 74, left hemisphere 106.7
2109 Female, age 72, unknown 99.7
1968 Male, age 76, left hemisphere 97.8
2115 Male, age 80, left hemisphere 96.8
1863 Male, age 55, unknown 90.1
2727 Male, age 61, right hemisphere 77.2
2787 Female, age 85, both hemispheres 68.6
Pontine raphe nucleus
nTPM: 79.2
2853 Male, age 76, midline 80.7
2122 Female, age 85, midline 77.8
Posteroventral cochlear nucleus
nTPM: 112.1
2341 Male, age 80, both hemispheres 135.0
2135 Female, age 91, both hemispheres 132.4
2371 Male, age 61, both hemispheres 108.7
2070 Male, age 76, both hemispheres 98.4
2752 Female, age 85, both hemispheres 85.9
Prepositus hypoglossal nucleus
nTPM: 107.9
2855 Female, age 85, right hemisphere 130.1
2086 Male, age 80, both hemispheres 85.8
Principal sensory trigeminal nucleus
nTPM: 92.9
2367 Female, age 91, left hemisphere 107.2
2324 Male, age 76, both hemispheres 105.9
2008 Male, age 80, left hemisphere 83.9
2158 Male, age 61, both hemispheres 74.6
Reticular pontine nucleus, caudal
nTPM: 96.3
2559 Male, age 74, both hemispheres 103.4
2092 Male, age 76, both hemispheres 102.0
2457 Female, age 91, both hemispheres 101.5
2332 Male, age 80, right hemisphere 78.4
Reticular pontine nucleus, oral
nTPM: 98.8
1939 Male, age 80, both hemispheres 103.1
2366 Female, age 91, both hemispheres 102.7
2361 Male, age 74, both hemispheres 97.2
2012 Female, age 85, both hemispheres 95.8
2167 Male, age 76, both hemispheres 95.2
Reticulotegmental nucleus
nTPM: 93.3
2322 Female, age 91, both hemispheres 103.4
2333 Male, age 80, both hemispheres 96.6
2452 Male, age 74, both hemispheres 89.8
2325 Male, age 76, both hemispheres 83.6
Spinal trigeminal nucleus, caudal
nTPM: 102.0
2312 Male, age 61, both hemispheres 117.7
2447 Male, age 76, both hemispheres 113.3
2308 Male, age 80, both hemispheres 105.8
2390 Female, age 91, both hemispheres 95.8
2642 Male, age 74, both hemispheres 77.6
Spinal trigeminal nucleus, interpolar
nTPM: 96.1
2625 Male, age 61, both hemispheres 113.6
2066 Male, age 76, right hemisphere 94.4
2386 Female, age 85, both hemispheres 91.0
2033 Male, age 80, both hemispheres 90.7
2389 Female, age 91, both hemispheres 90.6
Spinal trigeminal nucleus, oral
nTPM: 92.5
2164 Male, age 80, both hemispheres 102.6
1978 Male, age 76, both hemispheres 90.0
2737 Female, age 85, both hemispheres 85.0
Spinal vestibular nucleus
nTPM: 97.7
2806 Female, age 85, both hemispheres 107.9
2748 Male, age 76, both hemispheres 105.3
2384 Male, age 74, both hemispheres 102.2
2186 Female, age 91, both hemispheres 95.1
2780 Male, age 80, both hemispheres 94.1
2796 Male, age 61, both hemispheres 81.3
Subcoeruleus area
nTPM: 96.2
2369 Female, age 85, left hemisphere 137.0
2089 Male, age 76, left hemisphere 95.4
1958 Male, age 80, both hemispheres 91.9
2451 Male, age 74, both hemispheres 84.0
2323 Female, age 91, left hemisphere 72.8
Superior olive
nTPM: 92.9
2020 Male, age 76, both hemispheres 107.7
2329 Male, age 80, right hemisphere 98.3
2364 Male, age 74, right hemisphere 87.9
2561 Female, age 91, both hemispheres 87.2
1875 Female, age 85, both hemispheres 83.3
Superior vestibular nucleus
nTPM: 95.9
2015 Male, age 80, both hemispheres 104.0
2061 Male, age 76, both hemispheres 98.2
2383 Male, age 74, both hemispheres 85.4
Ventral medullary reticular nucleus
nTPM: 110.2
2372 Male, age 61, both hemispheres 121.0
2060 Male, age 76, both hemispheres 99.4
Ventral periolivary nuclei
nTPM: 89.6
2023 Male, age 76, both hemispheres 111.0
2165 Male, age 80, both hemispheres 90.3
2794 Female, age 91, left hemisphere 78.6
2130 Female, age 85, both hemispheres 78.5
Ventrolateral medulla, A1-C1 cell groups
nTPM: 105.8
2118 Male, age 80, both hemispheres 119.6
2180 Male, age 61, both hemispheres 107.3
1986 Male, age 76, both hemispheres 104.4
2741 Female, age 85, both hemispheres 99.2
2302 Female, age 91, both hemispheres 98.7
Ventrolateral tegmental area, A5 NE cell group
nTPM: 92.9
2456 Female, age 91, both hemispheres 103.4
1959 Male, age 76, both hemispheres 94.0
2161 Male, age 80, both hemispheres 93.7
2359 Male, age 61, both hemispheres 93.4
2840 Female, age 85, both hemispheres 91.8
2449 Male, age 74, both hemispheres 81.0

PONS AND MEDULLA - FANTOM5 CAGEi
Max Scaled Tags Per Million 261.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 261.9
FF:10182-103D2 60 years, female 271.8
FF:10165-103B3 76 years, female 252.1
Medulla oblongata
Scaled Tags Per Million: 212.8
FF:10038-101F2 18-64 years, mixed 224.7
FF:10155-103A2 76 years, female 215.5
FF:10174-103C3 60 years, female 198.2
Pons
Scaled Tags Per Million: 167.4
FF:10033-101E6 18-54 years, mixed 167.4

PONS AND MEDULLA - Pig RNA-seqi
Average nTPM 61.7
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 61.7
Samples: 4

Max nTPM: 68.9
Min nTPM: 46.0
Sample A Female 46.0
Sample B Female 68.9
Sample C Male 64.6
Sample D Male 67.3
Pons
nTPM: 54.1
Samples: 4

Max nTPM: 63.6
Min nTPM: 50.2
Sample A Female 50.6
Sample B Female 50.2
Sample C Male 52.0
Sample D Male 63.6

PONS AND MEDULLA - Mouse RNA-seqi
Average nTPM 111.9
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 111.9
Samples: 4

Max nTPM: 123.6
Min nTPM: 99.9
Sample A Male 103.4
Sample B Male 99.9
Sample C Female 120.7
Sample D Female 123.6

PONS AND MEDULLA - Allen Mouse ISHi
Max Expression energy 1.5
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 1.5
69236712 Antisense, RP_050331_01_A02, Mouse strain C57BL/6J (56 days, male) 2.3
74724530 Antisense, RP_060220_04_A02, Mouse strain C57BL/6J (56 days, male) 0.7
Pons
Expression energy: 1.2
69236712 Antisense, RP_050331_01_A02, Mouse strain C57BL/6J (56 days, male) 2.0
74724530 Antisense, RP_060220_04_A02, Mouse strain C57BL/6J (56 days, male) 0.5

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The Human Protein Atlas

The Human Protein Atlas project is funded
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