HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:49.2 nTPM
HPA:49.2 nTPM
GTEx:44.9 nTPM
FANTOM5:63.8 Scaled Tags Per Million
Pig:9.4 nTPM
Mouse:42.6 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA035978
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 49.2
Sample id Sample description nTPM
Hippocampus
nTPM: 46.0
2621 Female, age 67, right hemisphere 50.3
1898 Male, age 80, left hemisphere 49.4
1911 Female, age 85, right hemisphere 45.5
2529 Female, age 94, left hemisphere 44.7
2148 Female, age 91, left hemisphere 43.7
1855 Male, age 76, left hemisphere 42.5
Dentate gyrus
nTPM: 44.2
2246 Female, age 85, both hemispheres 48.3
2528 Male, age 74, both hemispheres 44.9
2010 Male, age 76, both hemispheres 43.4
2531 Female, age 67, both hemispheres 43.4
1927 Female, age 91, both hemispheres 42.6
2530 Female, age 94, left hemisphere 42.3
Entorhinal gyrus
nTPM: 45.6
2764 Male, age 80, right hemisphere 48.1
2117 Female, age 91, right hemisphere 45.4
1787 Male, age 76, left hemisphere 45.1
1938 Female, age 85, left hemisphere 45.1
2613 Female, age 94, left hemisphere 44.9
2686 Male, age 75, right hemisphere 44.9
Hippocampus, CA1
nTPM: 44.1
2045 Male, age 76, both hemispheres 46.8
2527 Male, age 74, both hemispheres 45.0
1873 Female, age 85, both hemispheres 43.6
2082 Female, age 91, right hemisphere 43.0
2749 Male, age 80, left hemisphere 41.9
Hippocampus, CA2
nTPM: 43.8
1940 Female, age 85, left hemisphere 46.2
2113 Female, age 91, right hemisphere 44.5
2249 Male, age 74, both hemispheres 44.3
2437 Female, age 94, left hemisphere 44.2
1892 Male, age 76, both hemispheres 44.1
1963 Male, age 80, left hemisphere 39.7
Hippocampus, CA3
nTPM: 45.3
2620 Female, age 94, left hemisphere 50.6
1891 Female, age 85, both hemispheres 46.3
2436 Male, age 74, both hemispheres 45.3
1867 Male, age 76, both hemispheres 45.0
2137 Male, age 80, left hemisphere 43.9
2861 Female, age 67, both hemispheres 40.5
Parahippocampal cortex
nTPM: 46.2
1850 Male, age 80, both hemispheres 51.5
2018 Male, age 76, both hemispheres 47.9
2532 Female, age 72, left hemisphere 47.2
1933 Female, age 85, both hemispheres 47.1
2245 Female, age 91, both hemispheres 46.1
2693 Female, age 94, both hemispheres 45.3
2692 Male, age 74, both hemispheres 45.1
1990 Female, age 91, right hemisphere 44.6
2622 Female, age 67, right hemisphere 43.6
2250 Female, age 67, right hemisphere 43.3
Perirhinal gyrus
nTPM: 49.2
1794 Male, age 80, right hemisphere 52.6
1841 Female, age 85, right hemisphere 49.4
2848 Male, age 76, right hemisphere 48.5
2521 Female, age 94, right hemisphere 48.0
1847 Female, age 91, left hemisphere 47.6
Subiculum
nTPM: 46.0
2438 Female, age 94, left hemisphere 51.8
2042 Male, age 76, both hemispheres 46.8
2619 Male, age 74, both hemispheres 46.3
1901 Male, age 80, both hemispheres 45.2
1977 Female, age 85, both hemispheres 43.5
2729 Female, age 91, right hemisphere 42.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 44.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 44.9
Samples: 197

Max nTPM: 97.9
Min nTPM: 24.2
Std nTPM: 10.1
Median nTPM: 44.6
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 97.9
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 85.7
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 79.3
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 70.4
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 69.4
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 67.0
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 66.6
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 64.6
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 60.7
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 60.6
GTEX-183WM-0011-R1a-SM-718A8 70-79 years, female 60.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 63.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 63.8
FF:10169-103B7 60 years, female 65.9
FF:10153-102I9 76 years, female 61.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 9.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 9.4
Samples: 4

Max nTPM: 12.2
Min nTPM: 6.1
Sample A Female 11.2
Sample B Female 8.0
Sample C Male 12.2
Sample D Male 6.1
Entorhinal cortex
nTPM: 7.5
Samples: 4

Max nTPM: 9.3
Min nTPM: 5.8
Sample A Female 6.6
Sample B Female 9.3
Sample C Male 8.4
Sample D Male 5.8
Subiculum
nTPM: 7.4
Samples: 4

Max nTPM: 8.1
Min nTPM: 6.6
Sample A Female 8.1
Sample B Female 7.5
Sample C Male 6.6
Sample D Male 7.2
Ventral hippocampus
nTPM: 8.6
Samples: 4

Max nTPM: 9.2
Min nTPM: 7.3
Sample A Female 9.2
Sample B Female 7.3
Sample C Male 8.9
Sample D Male 9.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 42.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 42.6
Samples: 4

Max nTPM: 44.5
Min nTPM: 40.5
Sample A Male 42.5
Sample B Male 40.5
Sample C Female 42.9
Sample D Female 44.5
Hippocampal formation
nTPM: 38.6
Samples: 4

Max nTPM: 41.0
Min nTPM: 37.2
Sample A Male 41.0
Sample B Male 37.2
Sample C Female 38.4
Sample D Female 37.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
76003530 Antisense, RP_060608_02_F06, Mouse strain C57BL/6J (56 days, male) 0.3
74272477 Antisense, RP_050915_01_A01, Mouse strain C57BL/6J (56 days, male) 0.0

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The Human Protein Atlas

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