HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:30.4 nTPM
HPA:30.4 nTPM
GTEx:27.9 nTPM
FANTOM5:73.7 Scaled Tags Per Million
Pig:13.3 nTPM
Mouse:29.4 nTPM
Allen mouse:0.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA014480Antibody HPA019186
Glial cells Not detectedNot detected
Neuronal cells LowMedium




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 30.4
Sample id Sample description nTPM
Hippocampus
nTPM: 28.5
1898 Male, age 80, left hemisphere 30.8
2529 Female, age 94, left hemisphere 30.2
1855 Male, age 76, left hemisphere 29.0
2621 Female, age 67, right hemisphere 27.5
1911 Female, age 85, right hemisphere 27.3
2148 Female, age 91, left hemisphere 26.3
Dentate gyrus
nTPM: 27.8
1927 Female, age 91, both hemispheres 30.3
2010 Male, age 76, both hemispheres 28.9
2246 Female, age 85, both hemispheres 28.1
2528 Male, age 74, both hemispheres 26.9
2531 Female, age 67, both hemispheres 26.4
2530 Female, age 94, left hemisphere 26.0
Entorhinal gyrus
nTPM: 26.8
1938 Female, age 85, left hemisphere 28.4
2764 Male, age 80, right hemisphere 27.2
2117 Female, age 91, right hemisphere 27.0
1787 Male, age 76, left hemisphere 26.8
2613 Female, age 94, left hemisphere 26.0
2686 Male, age 75, right hemisphere 25.6
Hippocampus, CA1
nTPM: 28.9
2749 Male, age 80, left hemisphere 29.5
2527 Male, age 74, both hemispheres 29.2
1873 Female, age 85, both hemispheres 28.8
2045 Male, age 76, both hemispheres 28.8
2082 Female, age 91, right hemisphere 28.1
Hippocampus, CA2
nTPM: 29.0
1892 Male, age 76, both hemispheres 31.6
1963 Male, age 80, left hemisphere 29.9
1940 Female, age 85, left hemisphere 29.2
2249 Male, age 74, both hemispheres 28.7
2113 Female, age 91, right hemisphere 28.0
2437 Female, age 94, left hemisphere 26.6
Hippocampus, CA3
nTPM: 27.7
1867 Male, age 76, both hemispheres 30.4
1891 Female, age 85, both hemispheres 29.5
2137 Male, age 80, left hemisphere 29.4
2436 Male, age 74, both hemispheres 25.9
2620 Female, age 94, left hemisphere 25.5
2861 Female, age 67, both hemispheres 25.4
Parahippocampal cortex
nTPM: 27.7
1850 Male, age 80, both hemispheres 30.4
2018 Male, age 76, both hemispheres 29.6
1933 Female, age 85, both hemispheres 28.6
1990 Female, age 91, right hemisphere 28.5
2250 Female, age 67, right hemisphere 28.5
2693 Female, age 94, both hemispheres 27.4
2245 Female, age 91, both hemispheres 26.9
2532 Female, age 72, left hemisphere 26.3
2692 Male, age 74, both hemispheres 26.3
2622 Female, age 67, right hemisphere 24.3
Perirhinal gyrus
nTPM: 30.4
1841 Female, age 85, right hemisphere 32.7
1847 Female, age 91, left hemisphere 31.0
1794 Male, age 80, right hemisphere 30.3
2521 Female, age 94, right hemisphere 29.1
2848 Male, age 76, right hemisphere 29.1
Subiculum
nTPM: 27.3
1977 Female, age 85, both hemispheres 28.7
1901 Male, age 80, both hemispheres 28.0
2042 Male, age 76, both hemispheres 27.1
2619 Male, age 74, both hemispheres 26.8
2729 Female, age 91, right hemisphere 26.8
2438 Female, age 94, left hemisphere 26.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 27.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 27.9
Samples: 197

Max nTPM: 78.8
Min nTPM: 12.0
Std nTPM: 8.2
Median nTPM: 26.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 78.8
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 53.8
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 45.2
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 44.5
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 44.5
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 42.7
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 42.3
GTEX-X585-0011-R1B-SM-46MVE 50-59 years, male 40.9
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 40.7
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 40.6
GTEX-1H3NZ-0011-R1a-SM-CKZP5 60-69 years, male 40.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 73.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 73.7
FF:10169-103B7 60 years, female 87.8
FF:10153-102I9 76 years, female 59.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 13.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 13.3
Samples: 4

Max nTPM: 16.3
Min nTPM: 11.6
Sample A Female 16.3
Sample B Female 12.5
Sample C Male 12.7
Sample D Male 11.6
Entorhinal cortex
nTPM: 10.9
Samples: 4

Max nTPM: 11.4
Min nTPM: 9.8
Sample A Female 11.2
Sample B Female 11.4
Sample C Male 11.3
Sample D Male 9.8
Subiculum
nTPM: 11.4
Samples: 4

Max nTPM: 14.1
Min nTPM: 9.3
Sample A Female 14.1
Sample B Female 10.2
Sample C Male 9.3
Sample D Male 11.8
Ventral hippocampus
nTPM: 11.5
Samples: 4

Max nTPM: 14.8
Min nTPM: 9.9
Sample A Female 14.8
Sample B Female 9.9
Sample C Male 10.0
Sample D Male 11.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 29.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 24.3
Samples: 4

Max nTPM: 26.2
Min nTPM: 22.0
Sample A Male 23.4
Sample B Male 25.6
Sample C Female 26.2
Sample D Female 22.0
Hippocampal formation
nTPM: 29.4
Samples: 4

Max nTPM: 30.3
Min nTPM: 28.4
Sample A Male 30.3
Sample B Male 28.4
Sample C Female 29.0
Sample D Female 29.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.2
70445377 Antisense, RP_050614_03_F08, Mouse strain C57BL/6J (56 days, male) 0.2

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