HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:28.3 nTPM
HPA:28.3 nTPM
GTEx:80.1 nTPM
FANTOM5:180.1 Scaled Tags Per Million
Pig:39.7 nTPM
Mouse:21.9 nTPM
Allen mouse:2.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA019149Antibody CAB004464
Glial cells HighNot detected
Neuronal cells HighNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 28.3
Sample id Sample description nTPM
Hippocampus
nTPM: 20.5
1898 Male, age 80, left hemisphere 25.8
1855 Male, age 76, left hemisphere 25.6
2621 Female, age 67, right hemisphere 21.4
1911 Female, age 85, right hemisphere 20.2
2148 Female, age 91, left hemisphere 15.2
2529 Female, age 94, left hemisphere 14.7
Dentate gyrus
nTPM: 19.7
1927 Female, age 91, both hemispheres 22.7
2530 Female, age 94, left hemisphere 22.3
2010 Male, age 76, both hemispheres 21.3
2528 Male, age 74, both hemispheres 18.4
2531 Female, age 67, both hemispheres 18.3
2246 Female, age 85, both hemispheres 14.9
Entorhinal gyrus
nTPM: 17.7
2117 Female, age 91, right hemisphere 28.1
1787 Male, age 76, left hemisphere 19.4
2686 Male, age 75, right hemisphere 19.2
2764 Male, age 80, right hemisphere 16.2
1938 Female, age 85, left hemisphere 13.0
2613 Female, age 94, left hemisphere 10.1
Hippocampus, CA1
nTPM: 28.3
2749 Male, age 80, left hemisphere 57.8
2045 Male, age 76, both hemispheres 35.1
1873 Female, age 85, both hemispheres 19.8
2082 Female, age 91, right hemisphere 16.2
2527 Male, age 74, both hemispheres 12.4
Hippocampus, CA2
nTPM: 21.0
1892 Male, age 76, both hemispheres 27.6
1940 Female, age 85, left hemisphere 25.1
1963 Male, age 80, left hemisphere 21.1
2437 Female, age 94, left hemisphere 18.7
2249 Male, age 74, both hemispheres 17.0
2113 Female, age 91, right hemisphere 16.6
Hippocampus, CA3
nTPM: 22.4
1867 Male, age 76, both hemispheres 42.1
2137 Male, age 80, left hemisphere 37.9
2861 Female, age 67, both hemispheres 24.2
2436 Male, age 74, both hemispheres 15.1
1891 Female, age 85, both hemispheres 11.5
2620 Female, age 94, left hemisphere 3.4
Parahippocampal cortex
nTPM: 16.7
2245 Female, age 91, both hemispheres 29.2
2250 Female, age 67, right hemisphere 20.3
1990 Female, age 91, right hemisphere 19.3
2532 Female, age 72, left hemisphere 18.7
1933 Female, age 85, both hemispheres 17.5
2018 Male, age 76, both hemispheres 16.6
2622 Female, age 67, right hemisphere 15.5
1850 Male, age 80, both hemispheres 11.4
2693 Female, age 94, both hemispheres 11.4
2692 Male, age 74, both hemispheres 6.8
Perirhinal gyrus
nTPM: 17.9
1841 Female, age 85, right hemisphere 21.7
2848 Male, age 76, right hemisphere 18.5
1847 Female, age 91, left hemisphere 17.6
1794 Male, age 80, right hemisphere 16.2
2521 Female, age 94, right hemisphere 15.6
Subiculum
nTPM: 18.4
2042 Male, age 76, both hemispheres 24.9
1901 Male, age 80, both hemispheres 19.7
2729 Female, age 91, right hemisphere 18.7
1977 Female, age 85, both hemispheres 16.3
2619 Male, age 74, both hemispheres 15.8
2438 Female, age 94, left hemisphere 14.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 80.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 80.1
Samples: 197

Max nTPM: 344.1
Min nTPM: 15.3
Std nTPM: 59.1
Median nTPM: 61.4
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 344.1
GTEX-13OW7-0011-R1b-SM-5L3HF 50-59 years, male 310.0
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 309.2
GTEX-1IKK5-0011-R1b-SM-CE6SQ 60-69 years, male 284.8
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 283.3
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 228.0
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 208.7
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 198.3
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 191.8
GTEX-1IDJH-0011-R1b-SM-ARU6U 70-79 years, male 185.0
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 184.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 180.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 180.1
FF:10169-103B7 60 years, female 242.7
FF:10153-102I9 76 years, female 117.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 39.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 27.6
Samples: 4

Max nTPM: 33.4
Min nTPM: 22.6
Sample A Female 33.4
Sample B Female 23.0
Sample C Male 31.2
Sample D Male 22.6
Entorhinal cortex
nTPM: 39.7
Samples: 4

Max nTPM: 55.8
Min nTPM: 22.4
Sample A Female 55.8
Sample B Female 22.4
Sample C Male 37.9
Sample D Male 42.8
Subiculum
nTPM: 28.2
Samples: 4

Max nTPM: 37.9
Min nTPM: 14.8
Sample A Female 32.8
Sample B Female 14.8
Sample C Male 37.9
Sample D Male 27.3
Ventral hippocampus
nTPM: 30.5
Samples: 4

Max nTPM: 44.1
Min nTPM: 14.3
Sample A Female 21.8
Sample B Female 14.3
Sample C Male 44.1
Sample D Male 41.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 21.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 21.9
Samples: 4

Max nTPM: 39.6
Min nTPM: 9.1
Sample A Male 25.4
Sample B Male 39.6
Sample C Female 9.1
Sample D Female 13.5
Hippocampal formation
nTPM: 12.9
Samples: 4

Max nTPM: 15.9
Min nTPM: 10.1
Sample A Male 13.0
Sample B Male 15.9
Sample C Female 10.1
Sample D Female 12.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.3
2335 Antisense, RP_040507_01_D09, Mouse strain C57BL/6J (56 days, male) 2.3
2336 Antisense, RP_040507_01_D09, Mouse strain C57BL/6J (56 days, male) 1.4

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The Human Protein Atlas

The Human Protein Atlas project is funded
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