HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:42.2 nTPM
HPA:42.2 nTPM
GTEx:55.2 nTPM
FANTOM5:97.9 Scaled Tags Per Million
Pig:52.8 nTPM
Mouse:85.9 nTPM
Allen mouse:6.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA035734
Glial cells Not detected
Neuronal cells Not detected


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 42.2
Sample id Sample description nTPM
Hippocampus
nTPM: 38.3
2621 Female, age 67, right hemisphere 41.9
2529 Female, age 94, left hemisphere 41.1
1898 Male, age 80, left hemisphere 39.4
1855 Male, age 76, left hemisphere 36.1
1911 Female, age 85, right hemisphere 35.9
2148 Female, age 91, left hemisphere 35.4
Dentate gyrus
nTPM: 38.0
2530 Female, age 94, left hemisphere 43.8
2010 Male, age 76, both hemispheres 38.6
2531 Female, age 67, both hemispheres 37.7
2246 Female, age 85, both hemispheres 36.8
1927 Female, age 91, both hemispheres 35.9
2528 Male, age 74, both hemispheres 35.5
Entorhinal gyrus
nTPM: 42.2
2764 Male, age 80, right hemisphere 46.9
2117 Female, age 91, right hemisphere 42.0
1938 Female, age 85, left hemisphere 41.9
2613 Female, age 94, left hemisphere 41.4
1787 Male, age 76, left hemisphere 41.3
2686 Male, age 75, right hemisphere 39.5
Hippocampus, CA1
nTPM: 36.5
2749 Male, age 80, left hemisphere 39.0
2527 Male, age 74, both hemispheres 36.9
1873 Female, age 85, both hemispheres 36.7
2082 Female, age 91, right hemisphere 36.5
2045 Male, age 76, both hemispheres 33.5
Hippocampus, CA2
nTPM: 38.9
1940 Female, age 85, left hemisphere 41.6
1963 Male, age 80, left hemisphere 40.4
2249 Male, age 74, both hemispheres 40.0
2437 Female, age 94, left hemisphere 39.1
1892 Male, age 76, both hemispheres 36.2
2113 Female, age 91, right hemisphere 35.9
Hippocampus, CA3
nTPM: 42.2
2436 Male, age 74, both hemispheres 59.9
2861 Female, age 67, both hemispheres 42.4
1891 Female, age 85, both hemispheres 39.8
2137 Male, age 80, left hemisphere 37.2
2620 Female, age 94, left hemisphere 37.1
1867 Male, age 76, both hemispheres 36.9
Parahippocampal cortex
nTPM: 41.3
2532 Female, age 72, left hemisphere 45.4
1850 Male, age 80, both hemispheres 42.8
2018 Male, age 76, both hemispheres 42.0
2692 Male, age 74, both hemispheres 42.0
1990 Female, age 91, right hemisphere 41.2
2245 Female, age 91, both hemispheres 41.2
1933 Female, age 85, both hemispheres 41.0
2622 Female, age 67, right hemisphere 40.2
2693 Female, age 94, both hemispheres 38.8
2250 Female, age 67, right hemisphere 38.7
Perirhinal gyrus
nTPM: 41.0
1794 Male, age 80, right hemisphere 42.7
1847 Female, age 91, left hemisphere 42.4
2848 Male, age 76, right hemisphere 41.8
1841 Female, age 85, right hemisphere 41.7
2521 Female, age 94, right hemisphere 36.3
Subiculum
nTPM: 41.3
2438 Female, age 94, left hemisphere 44.3
2042 Male, age 76, both hemispheres 44.2
1901 Male, age 80, both hemispheres 41.8
1977 Female, age 85, both hemispheres 41.7
2619 Male, age 74, both hemispheres 40.7
2729 Female, age 91, right hemisphere 34.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 55.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 55.2
Samples: 197

Max nTPM: 136.3
Min nTPM: 36.1
Std nTPM: 12.3
Median nTPM: 53.1
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 136.3
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 93.5
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 92.2
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 85.9
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 85.1
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 81.4
GTEX-1E2YA-0011-R1b-SM-CJI29 50-59 years, male 81.2
GTEX-13S7M-0011-R1b-SM-5PNZE 60-69 years, female 79.0
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 78.5
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 77.2
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 76.1
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 97.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 97.9
FF:10153-102I9 76 years, female 109.1
FF:10169-103B7 60 years, female 86.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 52.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 47.8
Samples: 4

Max nTPM: 56.6
Min nTPM: 31.9
Sample A Female 52.8
Sample B Female 49.8
Sample C Male 56.6
Sample D Male 31.9
Entorhinal cortex
nTPM: 44.2
Samples: 4

Max nTPM: 46.3
Min nTPM: 41.7
Sample A Female 43.6
Sample B Female 45.0
Sample C Male 46.3
Sample D Male 41.7
Subiculum
nTPM: 49.3
Samples: 4

Max nTPM: 52.5
Min nTPM: 44.3
Sample A Female 52.5
Sample B Female 49.2
Sample C Male 51.0
Sample D Male 44.3
Ventral hippocampus
nTPM: 52.8
Samples: 4

Max nTPM: 69.4
Min nTPM: 40.6
Sample A Female 47.2
Sample B Female 40.6
Sample C Male 69.4
Sample D Male 54.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 85.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 83.9
Samples: 4

Max nTPM: 89.7
Min nTPM: 76.5
Sample A Male 76.5
Sample B Male 79.5
Sample C Female 89.7
Sample D Female 89.7
Hippocampal formation
nTPM: 86.0
Samples: 4

Max nTPM: 91.3
Min nTPM: 79.3
Sample A Male 79.3
Sample B Male 83.7
Sample C Female 91.3
Sample D Female 89.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.6
69529280 Antisense, RP_050421_03_H07, Mouse strain C57BL/6J (56 days, male) 6.6

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.