HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:1361.6 nTPM
HPA:1361.6 nTPM
GTEx:1385.0 nTPM
FANTOM5:294.0 Scaled Tags Per Million
Pig:161.4 nTPM
Mouse:1390.4 nTPM
Allen mouse:7.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA003371
Glial cells Not detected
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 1361.6
Sample id Sample description nTPM
Hippocampus
nTPM: 1337.8
2529 Female, age 94, left hemisphere 1390.1
1898 Male, age 80, left hemisphere 1378.7
1911 Female, age 85, right hemisphere 1339.7
2148 Female, age 91, left hemisphere 1313.7
2621 Female, age 67, right hemisphere 1311.7
1855 Male, age 76, left hemisphere 1292.8
Dentate gyrus
nTPM: 1342.7
2530 Female, age 94, left hemisphere 1381.7
2010 Male, age 76, both hemispheres 1357.4
1927 Female, age 91, both hemispheres 1336.4
2528 Male, age 74, both hemispheres 1336.4
2246 Female, age 85, both hemispheres 1329.1
2531 Female, age 67, both hemispheres 1315.5
Entorhinal gyrus
nTPM: 1335.3
1787 Male, age 76, left hemisphere 1362.0
2764 Male, age 80, right hemisphere 1349.7
2117 Female, age 91, right hemisphere 1346.9
1938 Female, age 85, left hemisphere 1336.5
2686 Male, age 75, right hemisphere 1325.4
2613 Female, age 94, left hemisphere 1291.1
Hippocampus, CA1
nTPM: 1344.2
2749 Male, age 80, left hemisphere 1384.5
2082 Female, age 91, right hemisphere 1348.1
2527 Male, age 74, both hemispheres 1339.8
1873 Female, age 85, both hemispheres 1332.5
2045 Male, age 76, both hemispheres 1316.0
Hippocampus, CA2
nTPM: 1361.6
1963 Male, age 80, left hemisphere 1413.5
1892 Male, age 76, both hemispheres 1389.6
2437 Female, age 94, left hemisphere 1365.8
2249 Male, age 74, both hemispheres 1350.9
2113 Female, age 91, right hemisphere 1332.2
1940 Female, age 85, left hemisphere 1317.7
Hippocampus, CA3
nTPM: 1325.1
1867 Male, age 76, both hemispheres 1383.5
1891 Female, age 85, both hemispheres 1348.3
2137 Male, age 80, left hemisphere 1344.1
2861 Female, age 67, both hemispheres 1305.0
2436 Male, age 74, both hemispheres 1303.0
2620 Female, age 94, left hemisphere 1266.7
Parahippocampal cortex
nTPM: 1333.0
2250 Female, age 67, right hemisphere 1394.4
2018 Male, age 76, both hemispheres 1392.7
1990 Female, age 91, right hemisphere 1345.1
1933 Female, age 85, both hemispheres 1339.8
1850 Male, age 80, both hemispheres 1333.0
2245 Female, age 91, both hemispheres 1331.9
2532 Female, age 72, left hemisphere 1316.7
2692 Male, age 74, both hemispheres 1296.4
2693 Female, age 94, both hemispheres 1296.1
2622 Female, age 67, right hemisphere 1283.6
Perirhinal gyrus
nTPM: 1351.8
1794 Male, age 80, right hemisphere 1381.1
1847 Female, age 91, left hemisphere 1358.2
1841 Female, age 85, right hemisphere 1357.6
2521 Female, age 94, right hemisphere 1331.8
2848 Male, age 76, right hemisphere 1329.9
Subiculum
nTPM: 1337.7
1977 Female, age 85, both hemispheres 1396.0
2042 Male, age 76, both hemispheres 1347.3
1901 Male, age 80, both hemispheres 1337.5
2438 Female, age 94, left hemisphere 1325.9
2729 Female, age 91, right hemisphere 1321.0
2619 Male, age 74, both hemispheres 1298.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 1385.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 1385.0
Samples: 197

Max nTPM: 6501.3
Min nTPM: 647.2
Std nTPM: 630.4
Median nTPM: 1224.3
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 6501.3
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 3415.2
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 3261.4
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 3041.9
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 3028.6
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 2967.4
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 2957.4
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 2804.8
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 2665.9
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 2393.1
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 2382.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 294.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 294.0
FF:10169-103B7 60 years, female 345.2
FF:10153-102I9 76 years, female 242.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 161.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 161.4
Samples: 4

Max nTPM: 242.9
Min nTPM: 87.9
Sample A Female 242.9
Sample B Female 140.8
Sample C Male 173.8
Sample D Male 87.9
Entorhinal cortex
nTPM: 142.8
Samples: 4

Max nTPM: 191.4
Min nTPM: 92.7
Sample A Female 119.2
Sample B Female 191.4
Sample C Male 168.0
Sample D Male 92.7
Subiculum
nTPM: 126.7
Samples: 4

Max nTPM: 191.8
Min nTPM: 96.1
Sample A Female 191.8
Sample B Female 114.0
Sample C Male 96.1
Sample D Male 104.9
Ventral hippocampus
nTPM: 145.7
Samples: 4

Max nTPM: 174.3
Min nTPM: 122.1
Sample A Female 158.3
Sample B Female 122.1
Sample C Male 174.3
Sample D Male 128.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 1390.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 1390.4
Samples: 4

Max nTPM: 1494.7
Min nTPM: 1214.5
Sample A Male 1474.7
Sample B Male 1494.7
Sample C Female 1377.5
Sample D Female 1214.5
Hippocampal formation
nTPM: 1332.7
Samples: 4

Max nTPM: 1457.1
Min nTPM: 1208.1
Sample A Male 1457.1
Sample B Male 1288.0
Sample C Female 1208.1
Sample D Female 1377.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 7.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 7.0
74425523 Antisense, RP_051214_02_E09, Mouse strain C57BL/6J (56 days, male) 9.3
68545854 Antisense, RP_050120_01_F03, Mouse strain C57BL/6J (56 days, male) 4.6

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The Human Protein Atlas

The Human Protein Atlas project is funded
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