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RPS21
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TISSUE PRIMARY DATA SMALL INTESTINE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Small intestine
Tissue proteome
Intestine
SMALL INTESTINE - Expression summary
Protein expression
Small intestinei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glandular cells: Medium
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:1592.2 nTPM
HPA:708.9 nTPM
GTEx:1592.2 nTPM
FANTOM5:268.6 Scaled Tags Per Million

SMALL INTESTINE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA003371
Glandular cells Medium



SMALL INTESTINE - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Read more
Average nTPM 708.9
overview
Male, age 65
Small intestine sample 232
nTPM: 869.7
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40

overview
Male, age 39
Small intestine sample 233
nTPM: 678.2
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55

overview
Male, age 68
Small intestine sample 234
nTPM: 628.6
Cell types%
Glandular cells:
30

Smooth muscle cells:
15

Other cell types:
55

N/A
Male, age 85
Small intestine sample 235
nTPM: 659.2

SMALL INTESTINE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 1592.2
GTEx sample id Sample description nTPM
Small Intestine - Terminal Ileum
Average nTPM: 1592.2
Samples: 187

Max nTPM: 3852.1
Min nTPM: 813.2
Std nTPM: 468.6
Median nTPM: 1513.4
GTEX-1NSGN-2126-SM-DPRYN 50-59 years, male 3852.1
GTEX-1MGNQ-2326-SM-EV7BG 40-49 years, male 3124.1
GTEX-WRHK-1026-SM-4MVOD 20-29 years, female 3041.8
GTEX-1EMGI-2826-SM-7IGMR 60-69 years, male 2844.1
GTEX-1PIEJ-1526-SM-E6CP8 20-29 years, female 2646.5
GTEX-14PK6-1626-SM-6871I 70-79 years, female 2637.6
GTEX-1RAZQ-2226-SM-DPRZR 30-39 years, male 2626.7
GTEX-VUSG-1726-SM-4KKZL 50-59 years, male 2556.9
GTEX-WH7G-1626-SM-4LVMY 40-49 years, male 2533.8
GTEX-1JJE9-2226-SM-CXZJM 70-79 years, male 2489.2
GTEX-16NGA-1126-SM-7KFSY 40-49 years, female 2488.6
GTEX-1GL5R-2026-SM-7MKHP 50-59 years, male 2405.5
GTEX-11TUW-1926-SM-5BC58 60-69 years, male 2398.4
GTEX-WFJO-0926-SM-4LVM2 30-39 years, male 2319.9
GTEX-183FY-1626-SM-793D8 20-29 years, male 2313.5
GTEX-Y5LM-1626-SM-4VDTB 40-49 years, female 2283.6
GTEX-11VI4-1626-SM-5EQKO 40-49 years, female 2269.6
GTEX-14XAO-1926-SM-6ETZO 60-69 years, female 2266.2
GTEX-16A39-1426-SM-6LLI6 30-39 years, female 2253.1
GTEX-1IKOE-1926-SM-ARU7V 30-39 years, female 2243.4
GTEX-1GMR3-2726-SM-7MKFB 40-49 years, male 2178.7
GTEX-1RAZA-1826-SM-DTXA2 20-29 years, male 2155.7
GTEX-X15G-1426-SM-4PQZK 50-59 years, female 2109.3
GTEX-1KXAM-2026-SM-DHXKI 60-69 years, male 2104.3
GTEX-1PDJ9-1826-SM-E9U66 20-29 years, male 2097.5
GTEX-1QPFJ-2626-SM-DPRZU 30-39 years, female 2063.9
GTEX-1399U-2126-SM-5IFEZ 50-59 years, female 2051.8
GTEX-13RTK-0826-SM-5Q5C6 20-29 years, male 2029.8
GTEX-13O61-1326-SM-5KM31 60-69 years, male 2022.7
GTEX-VJYA-0926-SM-4KL1N 60-69 years, male 1997.1
GTEX-1H11D-2526-SM-9JGGU 40-49 years, male 1980.4
GTEX-1H1DE-1426-SM-9JGHV 20-29 years, male 1968.6
GTEX-13FH7-1226-SM-5IJFK 50-59 years, female 1959.5
GTEX-11P82-0826-SM-5P9GU 20-29 years, male 1950.5
GTEX-1CB4F-1826-SM-7MGXI 60-69 years, male 1942.1
GTEX-1LBAC-1526-SM-CXZKU 20-29 years, male 1914.9
GTEX-1QP28-1726-SM-E6CRK 50-59 years, female 1908.6
GTEX-ZLFU-1526-SM-4WWBT 40-49 years, male 1886.2
GTEX-15DZA-0826-SM-6AJBF 30-39 years, female 1881.3
GTEX-14PKU-1626-SM-6871C 40-49 years, female 1878.7
GTEX-1L5NE-1826-SM-EV79T 50-59 years, male 1878.1
GTEX-139T6-1026-SM-5IJGC 50-59 years, male 1867.6
GTEX-1OJC3-1626-SM-E9U65 20-29 years, male 1866.6
GTEX-ZVP2-1726-SM-5GU5P 50-59 years, male 1864.3
GTEX-1B8KE-1726-SM-7IGMN 50-59 years, male 1860.5
GTEX-18QFQ-1626-SM-72D7H 30-39 years, male 1855.2
GTEX-13W3W-2026-SM-5K7UL 60-69 years, female 1855.1
GTEX-11NSD-1726-SM-5N9C3 20-29 years, male 1824.1
GTEX-1HSMQ-2226-SM-C1YRD 50-59 years, male 1804.4
GTEX-UPK5-2026-SM-4JBIM 40-49 years, male 1802.5
GTEX-14E6E-1626-SM-5RQI7 30-39 years, male 1799.0
GTEX-ZA64-1226-SM-5HL7B 20-29 years, male 1783.3
GTEX-Y3IK-1726-SM-4YCCR 50-59 years, female 1782.2
GTEX-1LGOU-1426-SM-D3L8N 20-29 years, female 1750.2
GTEX-11XUK-1426-SM-5EQMG 40-49 years, female 1741.7
GTEX-1QP2A-2426-SM-EXOJA 50-59 years, male 1736.3
GTEX-1F75I-2526-SM-9WPOZ 40-49 years, male 1728.4
GTEX-ZF29-1626-SM-4WKFJ 60-69 years, female 1724.4
GTEX-14BMU-1426-SM-5TDE5 20-29 years, female 1718.8
GTEX-1LH75-1926-SM-DIPGD 50-59 years, female 1717.5
GTEX-X5EB-1626-SM-4E3IV 40-49 years, male 1710.3
GTEX-1GMR2-1026-SM-7MKHJ 50-59 years, male 1703.2
GTEX-1C475-1426-SM-793CH 40-49 years, female 1702.6
GTEX-131XG-1726-SM-5LZUR 50-59 years, female 1694.3
GTEX-139YR-2226-SM-5IFFW 50-59 years, male 1684.4
GTEX-148VJ-2226-SM-5NQ9M 70-79 years, male 1675.9
GTEX-1R9K4-2326-SM-E6CRB 60-69 years, male 1664.6
GTEX-13QBU-1926-SM-5IJEW 40-49 years, female 1659.2
GTEX-1JMQK-2426-SM-CXZJU 60-69 years, male 1657.0
GTEX-18A66-2526-SM-7KFTZ 60-69 years, male 1650.5
GTEX-1K9T9-2726-SM-D4P3E 50-59 years, female 1647.9
GTEX-12BJ1-1926-SM-5HL9Z 60-69 years, male 1645.8
GTEX-13X6H-1826-SM-7EWCZ 50-59 years, female 1643.0
GTEX-ZEX8-1826-SM-57WBH 50-59 years, male 1642.9
GTEX-Y5V5-1826-SM-4VDS5 60-69 years, female 1639.4
GTEX-14PKV-2026-SM-6AJ9A 20-29 years, female 1635.2
GTEX-Y3I4-1326-SM-4TT8Z 50-59 years, male 1633.5
GTEX-ZTPG-2626-SM-57WFX 20-29 years, female 1620.0
GTEX-17MFQ-1026-SM-7KFSZ 20-29 years, male 1611.6
GTEX-13NYB-1826-SM-5J1N3 40-49 years, male 1609.7
GTEX-XGQ4-1326-SM-4GIDU 50-59 years, male 1607.6
GTEX-YEC4-1726-SM-4W21E 40-49 years, male 1605.5
GTEX-1S5ZA-1326-SM-EV7BB 20-29 years, male 1602.9
GTEX-ZC5H-2326-SM-4WAYT 40-49 years, female 1601.0
GTEX-WEY5-1526-SM-4LMJF 40-49 years, female 1596.0
GTEX-16AAH-1426-SM-7KFTR 50-59 years, male 1587.7
GTEX-1J8QM-1026-SM-C1YQA 60-69 years, female 1572.3
GTEX-Z9EW-0926-SM-5CVMM 40-49 years, male 1572.1
GTEX-1399R-2026-SM-5K7WN 30-39 years, male 1543.5
GTEX-145ME-0926-SM-5O9AR 40-49 years, female 1542.7
GTEX-1AX8Z-2526-SM-731E3 60-69 years, male 1536.4
GTEX-13113-1226-SM-5EGHT 60-69 years, female 1533.6
GTEX-ZG7Y-1926-SM-DNZZ5 50-59 years, male 1518.1
GTEX-XUZC-1426-SM-4BRV3 30-39 years, female 1513.4
GTEX-1JN76-1126-SM-C1YRL 20-29 years, female 1513.4
GTEX-1CAMR-0826-SM-7MKFK 20-29 years, male 1492.0
GTEX-13CF3-1226-SM-5LZXN 60-69 years, female 1464.9
GTEX-11DXX-1626-SM-5H11H 60-69 years, female 1464.6
GTEX-1R7EV-1226-SM-DTX82 40-49 years, male 1463.0
GTEX-14DAR-1426-SM-5RQIR 50-59 years, male 1459.5
GTEX-11I78-1126-SM-5A5K5 50-59 years, female 1450.1
GTEX-15G1A-1726-SM-6LPI4 30-39 years, male 1449.0
GTEX-1RAZR-1826-SM-E6CRE 40-49 years, male 1446.9
GTEX-1I1GT-1826-SM-ARZLW 60-69 years, female 1441.9
GTEX-ZLWG-1626-SM-DNZZ1 50-59 years, female 1436.9
GTEX-ZZ64-0526-SM-5GZXM 20-29 years, male 1434.6
GTEX-117YX-0326-SM-5GICL 50-59 years, male 1428.8
GTEX-WQUQ-2426-SM-4MVNW 60-69 years, male 1422.9
GTEX-1192X-2526-SM-59868 50-59 years, male 1417.4
GTEX-11DXZ-1326-SM-5H11X 50-59 years, male 1417.2
GTEX-ZYFG-2026-SM-5E43Y 60-69 years, female 1412.9
GTEX-1B8KZ-1126-SM-7IGLX 50-59 years, male 1410.5
GTEX-XBED-1426-SM-4AT4G 60-69 years, male 1410.3
GTEX-WFG7-1726-SM-4LVME 20-29 years, male 1393.2
GTEX-13OVI-1926-SM-5IJCG 60-69 years, female 1385.9
GTEX-ZXES-1526-SM-5NQ95 30-39 years, female 1376.4
GTEX-1S82Z-1826-SM-E9TIK 30-39 years, female 1374.4
GTEX-ZP4G-1626-SM-57WGD 20-29 years, female 1370.1
GTEX-1399S-2026-SM-5KM4B 30-39 years, female 1365.5
GTEX-1QW4Y-1226-SM-EWRMY 30-39 years, male 1345.7
GTEX-ZQG8-2526-SM-57WEQ 60-69 years, female 1334.1
GTEX-YB5E-1526-SM-5IFIE 40-49 years, male 1333.8
GTEX-ZAB5-1526-SM-5HL9P 50-59 years, male 1329.0
GTEX-15EU6-1826-SM-7PC1W 50-59 years, male 1325.9
GTEX-12WSK-1526-SM-5CVNO 40-49 years, female 1324.3
GTEX-131XF-1326-SM-5GCMQ 60-69 years, male 1315.6
GTEX-XAJ8-0526-SM-47JYK 40-49 years, male 1312.4
GTEX-11P7K-1626-SM-5GU63 30-39 years, male 1307.3
GTEX-13FTW-2026-SM-5IJE2 40-49 years, male 1306.6
GTEX-11EQ9-1326-SM-5985X 30-39 years, male 1304.5
GTEX-WFG8-1626-SM-4LVMB 20-29 years, male 1300.3
GTEX-XMK1-1826-SM-4B66F 40-49 years, male 1299.2
GTEX-1R9JW-1926-SM-EVR4J 30-39 years, female 1296.6
GTEX-1CAMS-2426-SM-7DHMV 40-49 years, female 1295.4
GTEX-133LE-1426-SM-5IFH1 20-29 years, female 1282.9
GTEX-17KNJ-1626-SM-718AL 50-59 years, male 1271.2
GTEX-XPVG-1726-SM-4B65W 50-59 years, male 1255.3
GTEX-XXEK-1026-SM-4BRUW 50-59 years, male 1252.5
GTEX-145LT-1026-SM-5LU9O 40-49 years, male 1249.3
GTEX-ZPIC-2326-SM-57WDW 40-49 years, female 1246.1
GTEX-1MUQO-2426-SM-EAZ5A 60-69 years, male 1242.6
GTEX-14C39-1826-SM-5ZZW4 40-49 years, male 1240.1
GTEX-16MTA-1526-SM-6LPJB 50-59 years, male 1229.0
GTEX-13111-1426-SM-5DUW3 50-59 years, male 1224.3
GTEX-1R9PM-1626-SM-DPRY9 20-29 years, male 1223.3
GTEX-Y114-1426-SM-4TT6W 50-59 years, female 1222.9
GTEX-1JK1U-1226-SM-CNNPN 60-69 years, male 1222.1
GTEX-1OKEX-1126-SM-DTXEB 60-69 years, male 1219.5
GTEX-111YS-1426-SM-5GID8 60-69 years, male 1219.2
GTEX-17HHE-1726-SM-79OKT 50-59 years, male 1194.8
GTEX-14PJ3-1326-SM-664O7 50-59 years, male 1193.4
GTEX-WY7C-1826-SM-4ONCE 50-59 years, male 1192.6
GTEX-WHSB-1026-SM-4M1XN 50-59 years, male 1187.9
GTEX-131XE-0926-SM-5HL7J 50-59 years, male 1182.6
GTEX-13D11-0726-SM-5LZZB 50-59 years, female 1178.5
GTEX-ZTX8-0526-SM-59HLD 20-29 years, male 1171.2
GTEX-ZQUD-0926-SM-57WE3 30-39 years, male 1166.7
GTEX-1R7EU-1326-SM-E6CQ6 60-69 years, male 1147.4
GTEX-1AMFI-1926-SM-731F2 50-59 years, female 1147.2
GTEX-Y9LG-1626-SM-5IFHM 30-39 years, male 1145.9
GTEX-ZVT2-2126-SM-5NQ93 50-59 years, female 1144.2
GTEX-ZLV1-1126-SM-4WWBW 60-69 years, female 1132.4
GTEX-144GM-1026-SM-79OKU 20-29 years, male 1127.3
GTEX-14PJ6-1726-SM-6AJBN 60-69 years, female 1125.7
GTEX-1497J-1926-SM-5TDCC 60-69 years, male 1118.5
GTEX-WYJK-1526-SM-4ONCW 50-59 years, male 1116.1
GTEX-14PJN-0826-SM-686ZL 30-39 years, male 1092.0
GTEX-1C64O-2526-SM-79ONO 60-69 years, male 1087.9
GTEX-14PN3-2026-SM-68729 60-69 years, female 1086.5
GTEX-1BAJH-2526-SM-7IGOT 70-79 years, male 1086.1
GTEX-YF7O-1826-SM-5IFIU 50-59 years, male 1081.4
GTEX-YFCO-1326-SM-664NV 40-49 years, male 1077.4
GTEX-13PL7-2626-SM-5IFH4 60-69 years, female 1053.5
GTEX-1QCLZ-2126-SM-EWRNC 60-69 years, female 1041.5
GTEX-ZF2S-1726-SM-57WFT 50-59 years, female 1041.3
GTEX-Y111-2226-SM-4SOJB 50-59 years, male 1039.5
GTEX-ZPCL-1726-SM-57WEO 60-69 years, female 1035.6
GTEX-WFON-1526-SM-4LVMP 40-49 years, male 1025.0
GTEX-13O21-1026-SM-5IJDU 50-59 years, male 1024.4
GTEX-1122O-1326-SM-5H11F 60-69 years, female 1024.3
GTEX-111CU-1326-SM-5NQ8L 50-59 years, male 998.7
GTEX-11LCK-1926-SM-5A5KE 30-39 years, male 965.7
GTEX-ZVZP-1826-SM-5GZXB 50-59 years, male 962.9
GTEX-1R9K5-2026-SM-E6CPS 50-59 years, male 959.3
GTEX-ZTSS-0926-SM-59865 40-49 years, male 931.1
GTEX-ZDTT-1726-SM-5HL69 60-69 years, male 899.0
GTEX-1J8Q3-2526-SM-CNNQ4 60-69 years, male 813.2
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SMALL INTESTINE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 268.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Small intestine
Scaled Tags Per Million: 268.6
FF:10024-101D6 15,40,85 years, mixed 268.6

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