HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: High
Mouse brain, Intensity
Hippocampal formationi 		91.108
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:149.9 nTPM
HPA:149.9 nTPM
GTEx:152.0 nTPM
FANTOM5:305.7 Scaled Tags Per Million
Pig:349.5 nTPM
Mouse:357.5 nTPM
Allen mouse:15.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA013392Antibody HPA015600Antibody CAB004417
Glial cells HighHighMedium
Neuronal cells HighMediumHigh







HIPPOCAMPAL FORMATION - Mouse brain profilei , antibody CAB078783
Hippocampal formation mean intensity 91.108
intensityi
FRONT BACK
Polymorph layer of the dentate gyrus 71.600
Molecular layer of the dentate gyrus 74.388
Granular dentate gyrus 65.181
CA1 - oriens layer 82.562
CA1 - pyramidal layer 65.014
CA1 - radiatum layer 87.563
CA2 - oriens layer 79.224
CA2 - pyramidal layer 61.739
CA2 - radiatum layer 77.462
CA3 - oriens layer 62.269
CA3 - pyramidal layer 61.772
CA3 - radiatum layer 69.601
Stratum lucidum 70.593
Lacunosum moleculare 70.744
Subiculum 77.210

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 149.9
Sample id Sample description nTPM
Hippocampus
nTPM: 43.5
2621 Female, age 67, right hemisphere 71.2
1898 Male, age 80, left hemisphere 65.8
1855 Male, age 76, left hemisphere 39.8
2148 Female, age 91, left hemisphere 35.2
2529 Female, age 94, left hemisphere 31.3
1911 Female, age 85, right hemisphere 17.6
Dentate gyrus
nTPM: 52.5
2530 Female, age 94, left hemisphere 100.0
1927 Female, age 91, both hemispheres 67.3
2246 Female, age 85, both hemispheres 54.5
2010 Male, age 76, both hemispheres 41.2
2528 Male, age 74, both hemispheres 26.0
2531 Female, age 67, both hemispheres 25.9
Entorhinal gyrus
nTPM: 86.4
2613 Female, age 94, left hemisphere 140.1
2764 Male, age 80, right hemisphere 113.0
1787 Male, age 76, left hemisphere 91.6
1938 Female, age 85, left hemisphere 90.4
2686 Male, age 75, right hemisphere 61.3
2117 Female, age 91, right hemisphere 22.0
Hippocampus, CA1
nTPM: 52.5
2749 Male, age 80, left hemisphere 97.6
1873 Female, age 85, both hemispheres 63.0
2527 Male, age 74, both hemispheres 34.4
2045 Male, age 76, both hemispheres 33.9
2082 Female, age 91, right hemisphere 33.6
Hippocampus, CA2
nTPM: 60.4
1963 Male, age 80, left hemisphere 85.7
1940 Female, age 85, left hemisphere 80.5
1892 Male, age 76, both hemispheres 69.2
2437 Female, age 94, left hemisphere 63.4
2113 Female, age 91, right hemisphere 38.8
2249 Male, age 74, both hemispheres 24.8
Hippocampus, CA3
nTPM: 34.6
2137 Male, age 80, left hemisphere 50.3
2861 Female, age 67, both hemispheres 45.2
2620 Female, age 94, left hemisphere 36.3
1867 Male, age 76, both hemispheres 29.8
2436 Male, age 74, both hemispheres 25.1
1891 Female, age 85, both hemispheres 21.2
Parahippocampal cortex
nTPM: 106.8
2250 Female, age 67, right hemisphere 162.5
2245 Female, age 91, both hemispheres 138.4
2622 Female, age 67, right hemisphere 126.4
1850 Male, age 80, both hemispheres 125.5
2532 Female, age 72, left hemisphere 111.4
2693 Female, age 94, both hemispheres 107.5
1933 Female, age 85, both hemispheres 101.6
1990 Female, age 91, right hemisphere 96.3
2692 Male, age 74, both hemispheres 53.7
2018 Male, age 76, both hemispheres 44.2
Perirhinal gyrus
nTPM: 149.9
2521 Female, age 94, right hemisphere 200.8
1847 Female, age 91, left hemisphere 183.4
1794 Male, age 80, right hemisphere 148.1
1841 Female, age 85, right hemisphere 125.1
2848 Male, age 76, right hemisphere 91.9
Subiculum
nTPM: 37.9
1977 Female, age 85, both hemispheres 70.5
2619 Male, age 74, both hemispheres 67.5
2438 Female, age 94, left hemisphere 35.4
1901 Male, age 80, both hemispheres 27.9
2042 Male, age 76, both hemispheres 13.5
2729 Female, age 91, right hemisphere 12.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 152.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 152.0
Samples: 197

Max nTPM: 658.3
Min nTPM: 19.7
Std nTPM: 115.7
Median nTPM: 121.2
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 658.3
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 628.1
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 566.0
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 551.6
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 473.7
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 448.3
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 441.1
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 414.4
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 412.9
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 397.0
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 386.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 305.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 305.7
FF:10169-103B7 60 years, female 311.8
FF:10153-102I9 76 years, female 299.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 349.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 186.7
Samples: 4

Max nTPM: 260.4
Min nTPM: 79.1
Sample A Female 230.5
Sample B Female 176.7
Sample C Male 260.4
Sample D Male 79.1
Entorhinal cortex
nTPM: 315.3
Samples: 4

Max nTPM: 347.1
Min nTPM: 284.8
Sample A Female 328.9
Sample B Female 284.8
Sample C Male 347.1
Sample D Male 300.5
Subiculum
nTPM: 349.5
Samples: 4

Max nTPM: 462.3
Min nTPM: 300.3
Sample A Female 462.3
Sample B Female 300.3
Sample C Male 320.2
Sample D Male 315.0
Ventral hippocampus
nTPM: 171.3
Samples: 4

Max nTPM: 221.6
Min nTPM: 117.6
Sample A Female 117.6
Sample B Female 154.9
Sample C Male 191.0
Sample D Male 221.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 357.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 357.5
Samples: 4

Max nTPM: 470.7
Min nTPM: 280.0
Sample A Male 280.0
Sample B Male 339.5
Sample C Female 339.7
Sample D Female 470.7
Hippocampal formation
nTPM: 203.4
Samples: 4

Max nTPM: 276.0
Min nTPM: 134.0
Sample A Male 276.0
Sample B Male 192.0
Sample C Female 134.0
Sample D Female 211.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 15.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 15.6
79669511 Antisense, RP_071204_01_C11, Mouse strain C57BL/6J (56 days, male) 16.8
70928270 Antisense, RP_050725_02_C05, Mouse strain C57BL/6J (56 days, male) 14.4

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The Human Protein Atlas

The Human Protein Atlas project is funded
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