HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:48.0 nTPM
HPA:48.0 nTPM
GTEx:39.0 nTPM
FANTOM5:190.2 Scaled Tags Per Million
Pig:44.0 nTPM
Mouse:47.4 nTPM
Allen mouse:1.6 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 48.0
Sample id Sample description nTPM
Hippocampus
nTPM: 48.0
1855 Male, age 76, left hemisphere 58.2
2529 Female, age 94, left hemisphere 51.7
2148 Female, age 91, left hemisphere 50.3
1911 Female, age 85, right hemisphere 45.9
1898 Male, age 80, left hemisphere 44.6
2621 Female, age 67, right hemisphere 37.4
Dentate gyrus
nTPM: 38.7
2528 Male, age 74, both hemispheres 46.9
2530 Female, age 94, left hemisphere 41.4
2246 Female, age 85, both hemispheres 40.7
1927 Female, age 91, both hemispheres 37.4
2531 Female, age 67, both hemispheres 33.6
2010 Male, age 76, both hemispheres 32.1
Entorhinal gyrus
nTPM: 38.0
2117 Female, age 91, right hemisphere 51.2
1787 Male, age 76, left hemisphere 41.7
2686 Male, age 75, right hemisphere 38.2
1938 Female, age 85, left hemisphere 34.6
2764 Male, age 80, right hemisphere 32.2
2613 Female, age 94, left hemisphere 30.0
Hippocampus, CA1
nTPM: 39.4
2527 Male, age 74, both hemispheres 48.8
1873 Female, age 85, both hemispheres 47.0
2082 Female, age 91, right hemisphere 38.4
2045 Male, age 76, both hemispheres 34.3
2749 Male, age 80, left hemisphere 28.4
Hippocampus, CA2
nTPM: 41.1
2249 Male, age 74, both hemispheres 50.2
1940 Female, age 85, left hemisphere 45.2
2113 Female, age 91, right hemisphere 44.7
1963 Male, age 80, left hemisphere 39.7
2437 Female, age 94, left hemisphere 36.3
1892 Male, age 76, both hemispheres 30.3
Hippocampus, CA3
nTPM: 37.7
2861 Female, age 67, both hemispheres 43.0
1891 Female, age 85, both hemispheres 42.2
2620 Female, age 94, left hemisphere 40.1
2436 Male, age 74, both hemispheres 39.5
1867 Male, age 76, both hemispheres 31.3
2137 Male, age 80, left hemisphere 30.0
Parahippocampal cortex
nTPM: 35.1
2250 Female, age 67, right hemisphere 42.2
2692 Male, age 74, both hemispheres 40.4
2622 Female, age 67, right hemisphere 38.5
2245 Female, age 91, both hemispheres 36.6
1990 Female, age 91, right hemisphere 35.4
1933 Female, age 85, both hemispheres 33.6
1850 Male, age 80, both hemispheres 33.4
2693 Female, age 94, both hemispheres 32.0
2018 Male, age 76, both hemispheres 31.7
2532 Female, age 72, left hemisphere 27.0
Perirhinal gyrus
nTPM: 35.3
2848 Male, age 76, right hemisphere 38.8
1841 Female, age 85, right hemisphere 35.5
1847 Female, age 91, left hemisphere 35.2
2521 Female, age 94, right hemisphere 33.8
1794 Male, age 80, right hemisphere 33.1
Subiculum
nTPM: 39.1
2729 Female, age 91, right hemisphere 55.2
2619 Male, age 74, both hemispheres 43.9
2438 Female, age 94, left hemisphere 36.6
2042 Male, age 76, both hemispheres 34.6
1977 Female, age 85, both hemispheres 33.4
1901 Male, age 80, both hemispheres 31.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 39.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 39.0
Samples: 197

Max nTPM: 124.0
Min nTPM: 8.3
Std nTPM: 20.5
Median nTPM: 35.0
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 124.0
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 114.5
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 111.5
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 102.3
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 87.2
GTEX-13OW7-0011-R1b-SM-5L3HF 50-59 years, male 86.0
GTEX-1A3MX-0011-R1b-SM-7P8PH 60-69 years, male 83.4
GTEX-QDT8-0011-R1A-SM-32PKS 30-39 years, female 78.9
GTEX-1F75W-0011-R1a-SM-ARU81 60-69 years, male 78.9
GTEX-14PQA-0011-R1b-SM-6EU1G 50-59 years, female 78.7
GTEX-1BAJH-0011-R1a-SM-7P8SV 70-79 years, male 77.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 190.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 190.2
FF:10153-102I9 76 years, female 273.7
FF:10169-103B7 60 years, female 106.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 44.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 44.0
Samples: 4

Max nTPM: 57.5
Min nTPM: 32.8
Sample A Female 57.5
Sample B Female 32.8
Sample C Male 45.9
Sample D Male 39.8
Entorhinal cortex
nTPM: 36.6
Samples: 4

Max nTPM: 43.6
Min nTPM: 27.4
Sample A Female 38.4
Sample B Female 37.0
Sample C Male 43.6
Sample D Male 27.4
Subiculum
nTPM: 41.1
Samples: 4

Max nTPM: 51.8
Min nTPM: 32.3
Sample A Female 51.8
Sample B Female 32.3
Sample C Male 36.3
Sample D Male 44.0
Ventral hippocampus
nTPM: 43.7
Samples: 4

Max nTPM: 51.0
Min nTPM: 35.0
Sample A Female 51.0
Sample B Female 35.0
Sample C Male 50.7
Sample D Male 38.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 47.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 45.5
Samples: 4

Max nTPM: 52.3
Min nTPM: 40.5
Sample A Male 43.1
Sample B Male 40.5
Sample C Female 52.3
Sample D Female 46.0
Hippocampal formation
nTPM: 47.4
Samples: 4

Max nTPM: 50.8
Min nTPM: 42.5
Sample A Male 49.2
Sample B Male 42.5
Sample C Female 47.1
Sample D Female 50.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.6
73497044 Antisense, RP_051019_04_B09, Mouse strain C57BL/6J (56 days, male) 3.2
74357547 Antisense, RP_051019_04_B09, Mouse strain C57BL/6J (56 days, male) 1.3
70794013 Antisense, RP_050712_01_B10, Mouse strain C57BL/6J (56 days, male) 0.0

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The Human Protein Atlas

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