HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:52.8 nTPM
HPA:52.8 nTPM
GTEx:52.9 nTPM
FANTOM5:37.8 Scaled Tags Per Million
Pig:29.5 nTPM
Mouse:72.3 nTPM
Allen mouse:3.1 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPUS - Antibody stainingi
Antibody HPA062871
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 52.8
Sample id Sample description nTPM
Hippocampus
nTPM: 51.2
2621 Female, age 67, right hemisphere 53.8
2148 Female, age 91, left hemisphere 53.4
1855 Male, age 76, left hemisphere 52.7
1898 Male, age 80, left hemisphere 50.9
1911 Female, age 85, right hemisphere 48.9
2529 Female, age 94, left hemisphere 47.8
Dentate gyrus
nTPM: 51.2
2530 Female, age 94, left hemisphere 58.7
2531 Female, age 67, both hemispheres 52.1
1927 Female, age 91, both hemispheres 51.2
2010 Male, age 76, both hemispheres 49.5
2528 Male, age 74, both hemispheres 49.1
2246 Female, age 85, both hemispheres 46.5
Entorhinal gyrus
nTPM: 48.7
2613 Female, age 94, left hemisphere 51.6
2686 Male, age 75, right hemisphere 51.6
2117 Female, age 91, right hemisphere 51.3
2764 Male, age 80, right hemisphere 47.8
1787 Male, age 76, left hemisphere 45.6
1938 Female, age 85, left hemisphere 44.3
Hippocampus, CA1
nTPM: 50.8
2749 Male, age 80, left hemisphere 58.9
2527 Male, age 74, both hemispheres 49.0
1873 Female, age 85, both hemispheres 48.8
2045 Male, age 76, both hemispheres 48.8
2082 Female, age 91, right hemisphere 48.5
Hippocampus, CA2
nTPM: 51.1
1892 Male, age 76, both hemispheres 56.5
1963 Male, age 80, left hemisphere 56.3
2437 Female, age 94, left hemisphere 51.0
2113 Female, age 91, right hemisphere 49.8
2249 Male, age 74, both hemispheres 47.0
1940 Female, age 85, left hemisphere 45.8
Hippocampus, CA3
nTPM: 52.8
2861 Female, age 67, both hemispheres 60.8
2137 Male, age 80, left hemisphere 58.3
2620 Female, age 94, left hemisphere 56.8
1867 Male, age 76, both hemispheres 48.4
2436 Male, age 74, both hemispheres 48.2
1891 Female, age 85, both hemispheres 44.2
Parahippocampal cortex
nTPM: 48.4
2622 Female, age 67, right hemisphere 58.8
2245 Female, age 91, both hemispheres 51.2
2250 Female, age 67, right hemisphere 49.0
1933 Female, age 85, both hemispheres 48.1
2693 Female, age 94, both hemispheres 48.0
2532 Female, age 72, left hemisphere 47.9
2692 Male, age 74, both hemispheres 47.7
1990 Female, age 91, right hemisphere 44.5
1850 Male, age 80, both hemispheres 44.3
2018 Male, age 76, both hemispheres 44.0
Perirhinal gyrus
nTPM: 46.1
2848 Male, age 76, right hemisphere 47.4
2521 Female, age 94, right hemisphere 47.3
1847 Female, age 91, left hemisphere 45.9
1794 Male, age 80, right hemisphere 45.5
1841 Female, age 85, right hemisphere 44.3
Subiculum
nTPM: 48.8
2438 Female, age 94, left hemisphere 57.4
1901 Male, age 80, both hemispheres 49.0
2619 Male, age 74, both hemispheres 49.0
2729 Female, age 91, right hemisphere 47.4
2042 Male, age 76, both hemispheres 46.5
1977 Female, age 85, both hemispheres 43.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 52.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 52.9
Samples: 197

Max nTPM: 176.3
Min nTPM: 18.2
Std nTPM: 17.7
Median nTPM: 50.2
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 176.3
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 107.1
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 92.6
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 91.0
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 89.7
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 88.5
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 86.9
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 84.4
GTEX-1EH9U-0011-R1b-SM-CJI2B 60-69 years, male 84.3
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 84.2
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 83.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 37.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 37.8
FF:10153-102I9 76 years, female 46.3
FF:10169-103B7 60 years, female 29.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 29.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 27.2
Samples: 4

Max nTPM: 34.0
Min nTPM: 19.6
Sample A Female 34.0
Sample B Female 25.6
Sample C Male 29.7
Sample D Male 19.6
Entorhinal cortex
nTPM: 29.5
Samples: 4

Max nTPM: 31.9
Min nTPM: 27.8
Sample A Female 30.4
Sample B Female 27.8
Sample C Male 31.9
Sample D Male 27.8
Subiculum
nTPM: 27.5
Samples: 4

Max nTPM: 37.4
Min nTPM: 22.8
Sample A Female 37.4
Sample B Female 22.8
Sample C Male 26.5
Sample D Male 23.1
Ventral hippocampus
nTPM: 28.4
Samples: 4

Max nTPM: 39.0
Min nTPM: 18.9
Sample A Female 27.8
Sample B Female 18.9
Sample C Male 39.0
Sample D Male 28.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 72.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 71.3
Samples: 4

Max nTPM: 75.3
Min nTPM: 68.4
Sample A Male 68.4
Sample B Male 70.3
Sample C Female 71.1
Sample D Female 75.3
Hippocampal formation
nTPM: 72.3
Samples: 4

Max nTPM: 81.3
Min nTPM: 65.4
Sample A Male 65.4
Sample B Male 73.7
Sample C Female 68.8
Sample D Female 81.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.1
68797631 Antisense, RP_050210_02_G10, Mouse strain C57BL/6J (56 days, male) 3.2
75651149 Antisense, RP_060518_01_A03, Mouse strain C57BL/6J (56 days, male) 3.0

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The Human Protein Atlas

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