HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:38.7 nTPM
HPA:38.7 nTPM
GTEx:104.1 nTPM
FANTOM5:50.5 Scaled Tags Per Million
Pig:29.7 nTPM
Mouse:54.9 nTPM
Allen mouse:0.9 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 38.7
Sample id Sample description nTPM
Hippocampus
nTPM: 38.7
2529 Female, age 94, left hemisphere 42.3
2621 Female, age 67, right hemisphere 41.3
2148 Female, age 91, left hemisphere 41.2
1855 Male, age 76, left hemisphere 36.6
1898 Male, age 80, left hemisphere 36.4
1911 Female, age 85, right hemisphere 34.4
Dentate gyrus
nTPM: 34.7
2530 Female, age 94, left hemisphere 41.7
2010 Male, age 76, both hemispheres 35.2
2531 Female, age 67, both hemispheres 35.2
2528 Male, age 74, both hemispheres 33.7
2246 Female, age 85, both hemispheres 31.9
1927 Female, age 91, both hemispheres 30.3
Entorhinal gyrus
nTPM: 34.8
2117 Female, age 91, right hemisphere 43.5
2686 Male, age 75, right hemisphere 40.3
1787 Male, age 76, left hemisphere 33.0
2613 Female, age 94, left hemisphere 32.4
2764 Male, age 80, right hemisphere 30.9
1938 Female, age 85, left hemisphere 28.8
Hippocampus, CA1
nTPM: 30.6
2527 Male, age 74, both hemispheres 34.2
1873 Female, age 85, both hemispheres 34.1
2045 Male, age 76, both hemispheres 30.7
2082 Female, age 91, right hemisphere 29.5
2749 Male, age 80, left hemisphere 24.3
Hippocampus, CA2
nTPM: 32.3
1963 Male, age 80, left hemisphere 36.0
2437 Female, age 94, left hemisphere 35.3
1940 Female, age 85, left hemisphere 31.8
2249 Male, age 74, both hemispheres 30.7
2113 Female, age 91, right hemisphere 30.6
1892 Male, age 76, both hemispheres 29.1
Hippocampus, CA3
nTPM: 35.5
2861 Female, age 67, both hemispheres 57.4
1891 Female, age 85, both hemispheres 35.3
2620 Female, age 94, left hemisphere 34.3
2436 Male, age 74, both hemispheres 33.2
1867 Male, age 76, both hemispheres 29.9
2137 Male, age 80, left hemisphere 22.9
Parahippocampal cortex
nTPM: 34.2
2622 Female, age 67, right hemisphere 47.0
2692 Male, age 74, both hemispheres 41.6
2018 Male, age 76, both hemispheres 38.9
2245 Female, age 91, both hemispheres 34.5
2250 Female, age 67, right hemisphere 32.3
1990 Female, age 91, right hemisphere 31.6
2693 Female, age 94, both hemispheres 30.0
2532 Female, age 72, left hemisphere 29.8
1933 Female, age 85, both hemispheres 28.4
1850 Male, age 80, both hemispheres 27.9
Perirhinal gyrus
nTPM: 27.3
2848 Male, age 76, right hemisphere 29.5
1847 Female, age 91, left hemisphere 28.0
1794 Male, age 80, right hemisphere 27.2
1841 Female, age 85, right hemisphere 26.1
2521 Female, age 94, right hemisphere 25.9
Subiculum
nTPM: 36.5
2729 Female, age 91, right hemisphere 44.7
2619 Male, age 74, both hemispheres 41.5
2042 Male, age 76, both hemispheres 38.1
2438 Female, age 94, left hemisphere 35.7
1901 Male, age 80, both hemispheres 30.5
1977 Female, age 85, both hemispheres 28.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 104.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 104.1
Samples: 197

Max nTPM: 224.5
Min nTPM: 37.5
Std nTPM: 31.6
Median nTPM: 99.2
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 224.5
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 197.4
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 182.9
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 178.2
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 175.4
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 171.1
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 168.4
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 167.7
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 164.9
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 164.5
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 163.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 50.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 50.5
FF:10153-102I9 76 years, female 71.8
FF:10169-103B7 60 years, female 29.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 29.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 24.5
Samples: 4

Max nTPM: 29.4
Min nTPM: 16.6
Sample A Female 28.8
Sample B Female 23.0
Sample C Male 29.4
Sample D Male 16.6
Entorhinal cortex
nTPM: 29.7
Samples: 4

Max nTPM: 33.6
Min nTPM: 24.8
Sample A Female 28.0
Sample B Female 32.4
Sample C Male 33.6
Sample D Male 24.8
Subiculum
nTPM: 29.4
Samples: 4

Max nTPM: 36.8
Min nTPM: 26.4
Sample A Female 36.8
Sample B Female 26.5
Sample C Male 27.9
Sample D Male 26.4
Ventral hippocampus
nTPM: 26.3
Samples: 4

Max nTPM: 38.5
Min nTPM: 20.5
Sample A Female 24.6
Sample B Female 21.4
Sample C Male 38.5
Sample D Male 20.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 54.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 54.9
Samples: 4

Max nTPM: 56.7
Min nTPM: 53.5
Sample A Male 56.7
Sample B Male 54.8
Sample C Female 53.5
Sample D Female 54.6
Hippocampal formation
nTPM: 47.8
Samples: 4

Max nTPM: 53.1
Min nTPM: 40.9
Sample A Male 53.1
Sample B Male 48.0
Sample C Female 40.9
Sample D Female 49.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.9
75079746 Antisense, RP_060412_02_F02, Mouse strain C57BL/6J (56 days, male) 0.9
75694242 Antisense, RP_060412_02_F02, Mouse strain C57BL/6J (56 days, male) 0.8

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