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A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.
Protein expressioni
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM: 164.5
Min nTPM: 64.9
Std nTPM: 20.2
Median nTPM:
229_1
69 years, female
164.5
172_1
72 years, female
160.0
425_1
59 years, female
156.0
321_1
62 years, female
148.9
251_1
78 years, male
147.4
286_1
68 years, female
147.2
316_1
62 years, male
145.9
177_1
74 years, male
144.3
352_1
62 years, male
142.8
335_1
73 years, female
141.7
6_1
73 years, female
141.0
347_1
72 years, male
140.1
292_1
71 years, male
139.7
405_1
91 years, male
139.3
319_1
81 years, male
138.7
246_1
77 years, male
138.4
153_1
70 years, female
137.6
293_1
68 years, female
135.9
237_1
82 years, male
134.9
189_1
76 years, male
133.9
415_1
77 years, female
132.4
376_1
75 years, female
132.0
9_1
66 years, female
131.2
386_1
76 years, male
130.1
163_1
78 years, male
129.8
350_1
84 years, female
129.6
355_1
70 years, female
129.3
324_1
76 years, male
129.2
447_1
81 years, male
129.0
35_1
74 years, female
128.9
375_1
74 years, female
128.2
266_1
85 years, male
127.8
311_1
78 years, male
127.2
217_1
76 years, male
126.7
320_1
89 years, female
126.4
318_1
68 years, male
126.3
404_1
82 years, female
125.7
126_1
63 years, male
125.0
468_1
89 years, male
124.9
349_1
83 years, male
123.9
466_1
57 years, female
123.9
115_1
83 years, male
122.5
480_1
63 years, male
122.3
526_1
61 years, male
122.3
322_1
76 years, male
122.2
406_1
79 years, male
121.5
243_1
75 years, male
119.9
218_1
71 years, female
119.5
377_1
82 years, female
119.2
499_1
55 years, female
118.8
99_1
64 years, male
118.6
353_1
82 years, female
118.4
389_1
86 years, female
118.2
348_1
84 years, male
116.2
396_1
62 years, male
115.4
518_1
75 years, female
115.4
81_1
67 years, male
113.0
503_1
68 years, male
112.9
313_1
79 years, female
112.3
517_1
88 years, male
112.2
18_1
88 years, male
111.9
394_1
75 years, female
111.1
173_1
67 years, male
110.4
254_1
77 years, female
109.7
145_1
84 years, male
108.6
495_1
57 years, female
108.2
265_1
87 years, male
107.9
32_1
67 years, male
107.8
291_1
76 years, male
107.2
379_1
60 years, male
106.7
384_1
83 years, male
106.3
117_1
61 years, male
105.1
307_1
66 years, female
104.6
137_1
83 years, male
103.1
414_1
84 years, female
102.2
264_1
73 years, female
101.9
354_1
81 years, female
101.1
41_1
94 years, female
100.3
139_1
64 years, female
100.0
162_1
79 years, female
99.4
317_1
60 years, male
98.3
356_1
87 years, female
97.8
43_1
64 years, female
97.7
17_1
71 years, male
96.8
413_1
59 years, female
95.8
109_1
81 years, female
95.4
351_1
91 years, male
95.0
2_1
77 years, female
94.2
315_1
62 years, female
94.1
295_1
61 years, female
92.2
506_1
65 years, male
92.0
490_1
67 years, female
91.6
142_1
61 years, female
89.5
149_1
88 years, male
89.1
452_1
88 years, female
88.6
288_1
66 years, female
87.2
119_1
70 years, female
86.2
4_1
88 years, female
83.6
308_1
70 years, female
82.9
314_1
67 years, male
82.8
120_1
70 years, female
81.0
42_1
85 years, male
80.2
501_1
88 years, male
80.1
89_1
63 years, male
78.7
491_1
89 years, female
64.9
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
