HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:889.6 nTPM
HPA:889.6 nTPM
GTEx:643.7 nTPM
FANTOM5:82.7 Scaled Tags Per Million
Pig:243.2 nTPM
Mouse:329.2 nTPM
Allen mouse:14.6 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 889.6
Sample id Sample description nTPM
Hippocampus
nTPM: 875.7
1898 Male, age 80, left hemisphere 932.2
2529 Female, age 94, left hemisphere 889.3
2621 Female, age 67, right hemisphere 886.6
1911 Female, age 85, right hemisphere 854.6
1855 Male, age 76, left hemisphere 850.7
2148 Female, age 91, left hemisphere 841.0
Dentate gyrus
nTPM: 873.4
2530 Female, age 94, left hemisphere 931.1
2010 Male, age 76, both hemispheres 889.0
1927 Female, age 91, both hemispheres 858.7
2246 Female, age 85, both hemispheres 857.8
2531 Female, age 67, both hemispheres 856.5
2528 Male, age 74, both hemispheres 847.6
Entorhinal gyrus
nTPM: 873.0
1938 Female, age 85, left hemisphere 891.6
2764 Male, age 80, right hemisphere 883.3
2686 Male, age 75, right hemisphere 881.4
1787 Male, age 76, left hemisphere 872.1
2117 Female, age 91, right hemisphere 870.6
2613 Female, age 94, left hemisphere 838.9
Hippocampus, CA1
nTPM: 869.8
2749 Male, age 80, left hemisphere 888.5
2045 Male, age 76, both hemispheres 874.3
1873 Female, age 85, both hemispheres 873.6
2082 Female, age 91, right hemisphere 864.8
2527 Male, age 74, both hemispheres 848.0
Hippocampus, CA2
nTPM: 872.2
1963 Male, age 80, left hemisphere 899.0
2437 Female, age 94, left hemisphere 897.4
1892 Male, age 76, both hemispheres 890.5
2249 Male, age 74, both hemispheres 853.4
2113 Female, age 91, right hemisphere 847.9
1940 Female, age 85, left hemisphere 845.2
Hippocampus, CA3
nTPM: 864.5
1867 Male, age 76, both hemispheres 890.2
2861 Female, age 67, both hemispheres 872.2
2137 Male, age 80, left hemisphere 869.3
1891 Female, age 85, both hemispheres 860.8
2436 Male, age 74, both hemispheres 853.4
2620 Female, age 94, left hemisphere 841.3
Parahippocampal cortex
nTPM: 855.5
2018 Male, age 76, both hemispheres 902.4
1850 Male, age 80, both hemispheres 899.6
2250 Female, age 67, right hemisphere 864.8
1933 Female, age 85, both hemispheres 863.0
1990 Female, age 91, right hemisphere 853.8
2532 Female, age 72, left hemisphere 853.2
2245 Female, age 91, both hemispheres 847.9
2622 Female, age 67, right hemisphere 838.4
2692 Male, age 74, both hemispheres 826.2
2693 Female, age 94, both hemispheres 805.4
Perirhinal gyrus
nTPM: 889.6
1847 Female, age 91, left hemisphere 923.9
1841 Female, age 85, right hemisphere 914.2
1794 Male, age 80, right hemisphere 911.6
2848 Male, age 76, right hemisphere 868.0
2521 Female, age 94, right hemisphere 830.6
Subiculum
nTPM: 861.5
1977 Female, age 85, both hemispheres 885.8
2042 Male, age 76, both hemispheres 884.1
2619 Male, age 74, both hemispheres 856.3
1901 Male, age 80, both hemispheres 852.0
2438 Female, age 94, left hemisphere 848.5
2729 Female, age 91, right hemisphere 842.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 643.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 643.7
Samples: 197

Max nTPM: 1297.2
Min nTPM: 362.9
Std nTPM: 150.8
Median nTPM: 622.7
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 1297.2
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 1209.5
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 1163.6
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 1063.1
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 1020.7
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 989.8
GTEX-1HGF4-0011-R1a-SM-CJI3S 60-69 years, male 974.7
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 968.2
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 959.4
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 953.1
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 927.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 82.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 82.7
FF:10169-103B7 60 years, female 104.6
FF:10153-102I9 76 years, female 60.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 243.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 243.2
Samples: 4

Max nTPM: 303.9
Min nTPM: 194.0
Sample A Female 303.9
Sample B Female 237.9
Sample C Male 237.0
Sample D Male 194.0
Entorhinal cortex
nTPM: 226.1
Samples: 4

Max nTPM: 266.2
Min nTPM: 189.9
Sample A Female 216.8
Sample B Female 266.2
Sample C Male 231.6
Sample D Male 189.9
Subiculum
nTPM: 226.5
Samples: 4

Max nTPM: 305.4
Min nTPM: 189.0
Sample A Female 305.4
Sample B Female 208.3
Sample C Male 203.4
Sample D Male 189.0
Ventral hippocampus
nTPM: 226.8
Samples: 4

Max nTPM: 260.2
Min nTPM: 186.1
Sample A Female 233.1
Sample B Female 186.1
Sample C Male 260.2
Sample D Male 227.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 329.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 320.8
Samples: 4

Max nTPM: 345.9
Min nTPM: 304.0
Sample A Male 304.0
Sample B Male 310.2
Sample C Female 345.9
Sample D Female 323.2
Hippocampal formation
nTPM: 329.2
Samples: 4

Max nTPM: 364.5
Min nTPM: 298.5
Sample A Male 364.5
Sample B Male 298.5
Sample C Female 303.9
Sample D Female 349.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 14.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 14.6
74882810 Antisense, RP_060315_04_H02, Mouse strain C57BL/6J (56 days, male) 14.6
69818299 Antisense, RP_050510_04_G12, Mouse strain C57BL/6J (56 days, male) 14.5

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