HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:32.6 nTPM
HPA:32.6 nTPM
GTEx:41.5 nTPM
FANTOM5:72.3 Scaled Tags Per Million
Pig:79.8 nTPM
Mouse:174.0 nTPM
Allen mouse:21.6 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 32.6
Sample id Sample description nTPM
Hippocampus
nTPM: 24.4
2148 Female, age 91, left hemisphere 35.2
1898 Male, age 80, left hemisphere 31.6
2621 Female, age 67, right hemisphere 28.1
1855 Male, age 76, left hemisphere 27.5
2529 Female, age 94, left hemisphere 14.1
1911 Female, age 85, right hemisphere 9.9
Dentate gyrus
nTPM: 27.8
2531 Female, age 67, both hemispheres 36.0
2530 Female, age 94, left hemisphere 29.4
1927 Female, age 91, both hemispheres 27.8
2246 Female, age 85, both hemispheres 26.4
2010 Male, age 76, both hemispheres 26.2
2528 Male, age 74, both hemispheres 20.9
Entorhinal gyrus
nTPM: 29.5
2613 Female, age 94, left hemisphere 41.7
1938 Female, age 85, left hemisphere 33.8
2764 Male, age 80, right hemisphere 32.4
2686 Male, age 75, right hemisphere 28.3
1787 Male, age 76, left hemisphere 24.1
2117 Female, age 91, right hemisphere 16.8
Hippocampus, CA1
nTPM: 28.6
2749 Male, age 80, left hemisphere 40.5
2045 Male, age 76, both hemispheres 30.3
1873 Female, age 85, both hemispheres 29.0
2527 Male, age 74, both hemispheres 27.1
2082 Female, age 91, right hemisphere 16.0
Hippocampus, CA2
nTPM: 18.4
1963 Male, age 80, left hemisphere 31.8
1892 Male, age 76, both hemispheres 18.8
1940 Female, age 85, left hemisphere 18.6
2113 Female, age 91, right hemisphere 16.0
2437 Female, age 94, left hemisphere 13.6
2249 Male, age 74, both hemispheres 11.6
Hippocampus, CA3
nTPM: 24.4
2861 Female, age 67, both hemispheres 53.9
2620 Female, age 94, left hemisphere 41.2
2137 Male, age 80, left hemisphere 19.3
2436 Male, age 74, both hemispheres 11.7
1891 Female, age 85, both hemispheres 10.5
1867 Male, age 76, both hemispheres 10.0
Parahippocampal cortex
nTPM: 24.2
2622 Female, age 67, right hemisphere 34.1
1933 Female, age 85, both hemispheres 29.2
2250 Female, age 67, right hemisphere 28.6
2245 Female, age 91, both hemispheres 25.9
2693 Female, age 94, both hemispheres 25.9
2692 Male, age 74, both hemispheres 25.6
1850 Male, age 80, both hemispheres 23.7
1990 Female, age 91, right hemisphere 18.7
2532 Female, age 72, left hemisphere 18.3
2018 Male, age 76, both hemispheres 12.3
Perirhinal gyrus
nTPM: 32.6
2521 Female, age 94, right hemisphere 44.0
1847 Female, age 91, left hemisphere 39.6
1794 Male, age 80, right hemisphere 36.8
1841 Female, age 85, right hemisphere 21.6
2848 Male, age 76, right hemisphere 21.2
Subiculum
nTPM: 14.0
1977 Female, age 85, both hemispheres 25.2
2619 Male, age 74, both hemispheres 19.7
2729 Female, age 91, right hemisphere 14.8
2438 Female, age 94, left hemisphere 10.4
1901 Male, age 80, both hemispheres 9.8
2042 Male, age 76, both hemispheres 3.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 41.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 41.5
Samples: 197

Max nTPM: 126.5
Min nTPM: 4.4
Std nTPM: 22.9
Median nTPM: 36.9
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 126.5
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 113.7
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 113.1
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 96.8
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 91.5
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 91.2
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 91.2
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 89.9
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 83.6
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 82.3
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 80.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 72.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 72.3
FF:10153-102I9 76 years, female 75.5
FF:10169-103B7 60 years, female 69.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 79.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 79.8
Samples: 4

Max nTPM: 103.9
Min nTPM: 42.9
Sample A Female 80.9
Sample B Female 91.5
Sample C Male 42.9
Sample D Male 103.9
Entorhinal cortex
nTPM: 47.4
Samples: 4

Max nTPM: 52.8
Min nTPM: 43.8
Sample A Female 52.8
Sample B Female 43.8
Sample C Male 44.6
Sample D Male 48.5
Subiculum
nTPM: 43.7
Samples: 4

Max nTPM: 54.5
Min nTPM: 36.7
Sample A Female 54.5
Sample B Female 41.4
Sample C Male 42.0
Sample D Male 36.7
Ventral hippocampus
nTPM: 60.9
Samples: 4

Max nTPM: 66.4
Min nTPM: 51.8
Sample A Female 61.5
Sample B Female 51.8
Sample C Male 66.4
Sample D Male 63.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 174.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 132.2
Samples: 4

Max nTPM: 150.0
Min nTPM: 122.9
Sample A Male 123.2
Sample B Male 122.9
Sample C Female 132.5
Sample D Female 150.0
Hippocampal formation
nTPM: 174.0
Samples: 4

Max nTPM: 208.3
Min nTPM: 147.6
Sample A Male 147.6
Sample B Male 183.7
Sample C Female 208.3
Sample D Female 156.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 21.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 21.6
68522466 Antisense, RP_050118_02_B03, Mouse strain C57BL/6J (56 days, male) 21.9
71836872 Antisense, RP_051017_02_E02, Mouse strain C57BL/6J (56 days, male) 21.3

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