HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:41.5 nTPM
HPA:41.5 nTPM
GTEx:24.3 nTPM
FANTOM5:35.0 Scaled Tags Per Million
Mouse:10.2 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 41.5
Sample id Sample description nTPM
Hippocampus
nTPM: 41.0
1898 Male, age 80, left hemisphere 42.6
2529 Female, age 94, left hemisphere 41.7
1855 Male, age 76, left hemisphere 41.1
2621 Female, age 67, right hemisphere 40.7
1911 Female, age 85, right hemisphere 40.1
2148 Female, age 91, left hemisphere 40.0
Dentate gyrus
nTPM: 40.5
1927 Female, age 91, both hemispheres 41.1
2530 Female, age 94, left hemisphere 41.1
2528 Male, age 74, both hemispheres 40.8
2010 Male, age 76, both hemispheres 40.7
2246 Female, age 85, both hemispheres 40.3
2531 Female, age 67, both hemispheres 39.2
Entorhinal gyrus
nTPM: 40.4
2117 Female, age 91, right hemisphere 41.8
2764 Male, age 80, right hemisphere 41.2
1938 Female, age 85, left hemisphere 41.0
1787 Male, age 76, left hemisphere 40.7
2613 Female, age 94, left hemisphere 38.8
2686 Male, age 75, right hemisphere 38.7
Hippocampus, CA1
nTPM: 41.3
2749 Male, age 80, left hemisphere 42.3
2527 Male, age 74, both hemispheres 41.9
2045 Male, age 76, both hemispheres 41.5
1873 Female, age 85, both hemispheres 40.9
2082 Female, age 91, right hemisphere 40.1
Hippocampus, CA2
nTPM: 41.3
2249 Male, age 74, both hemispheres 42.4
1963 Male, age 80, left hemisphere 42.0
1940 Female, age 85, left hemisphere 41.3
1892 Male, age 76, both hemispheres 41.0
2113 Female, age 91, right hemisphere 40.5
2437 Female, age 94, left hemisphere 40.5
Hippocampus, CA3
nTPM: 40.7
2436 Male, age 74, both hemispheres 42.5
1891 Female, age 85, both hemispheres 41.1
1867 Male, age 76, both hemispheres 40.4
2137 Male, age 80, left hemisphere 40.4
2620 Female, age 94, left hemisphere 40.4
2861 Female, age 67, both hemispheres 39.6
Parahippocampal cortex
nTPM: 40.5
2692 Male, age 74, both hemispheres 41.3
1850 Male, age 80, both hemispheres 40.8
2250 Female, age 67, right hemisphere 40.8
1933 Female, age 85, both hemispheres 40.7
1990 Female, age 91, right hemisphere 40.7
2532 Female, age 72, left hemisphere 40.6
2018 Male, age 76, both hemispheres 40.4
2693 Female, age 94, both hemispheres 40.3
2245 Female, age 91, both hemispheres 40.0
2622 Female, age 67, right hemisphere 39.7
Perirhinal gyrus
nTPM: 41.5
1794 Male, age 80, right hemisphere 42.3
1847 Female, age 91, left hemisphere 42.3
1841 Female, age 85, right hemisphere 42.2
2521 Female, age 94, right hemisphere 40.3
2848 Male, age 76, right hemisphere 40.3
Subiculum
nTPM: 40.2
2619 Male, age 74, both hemispheres 41.5
1901 Male, age 80, both hemispheres 41.1
1977 Female, age 85, both hemispheres 40.9
2729 Female, age 91, right hemisphere 40.4
2042 Male, age 76, both hemispheres 39.6
2438 Female, age 94, left hemisphere 37.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 24.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 24.3
Samples: 197

Max nTPM: 66.4
Min nTPM: 13.6
Std nTPM: 5.4
Median nTPM: 23.3
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 66.4
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 42.4
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 41.6
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 37.6
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 35.6
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 34.4
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 34.2
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 33.5
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 33.1
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 33.0
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 32.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 35.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 35.0
FF:10169-103B7 60 years, female 36.6
FF:10153-102I9 76 years, female 33.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 10.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 9.8
Samples: 4

Max nTPM: 11.0
Min nTPM: 8.6
Sample A Male 9.7
Sample B Male 9.9
Sample C Female 11.0
Sample D Female 8.6
Hippocampal formation
nTPM: 10.2
Samples: 4

Max nTPM: 12.9
Min nTPM: 9.2
Sample A Male 12.9
Sample B Male 9.3
Sample C Female 9.5
Sample D Female 9.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
74822938 Antisense, RP_060321_01_A11, Mouse strain C57BL/6J (56 days, male) 0.0

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The Human Protein Atlas

The Human Protein Atlas project is funded
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