HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:10.7 nTPM
HPA:10.7 nTPM
GTEx:12.3 nTPM
FANTOM5:28.9 Scaled Tags Per Million
Pig:5.1 nTPM
Mouse:30.8 nTPM
Allen mouse:2.0 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 10.7
Sample id Sample description nTPM
Hippocampus
nTPM: 9.8
1898 Male, age 80, left hemisphere 15.3
2621 Female, age 67, right hemisphere 12.7
1855 Male, age 76, left hemisphere 8.8
2148 Female, age 91, left hemisphere 8.3
1911 Female, age 85, right hemisphere 7.9
2529 Female, age 94, left hemisphere 5.9
Dentate gyrus
nTPM: 8.9
2530 Female, age 94, left hemisphere 12.0
2010 Male, age 76, both hemispheres 11.2
1927 Female, age 91, both hemispheres 9.4
2246 Female, age 85, both hemispheres 8.3
2531 Female, age 67, both hemispheres 6.9
2528 Male, age 74, both hemispheres 5.5
Entorhinal gyrus
nTPM: 6.2
2686 Male, age 75, right hemisphere 9.7
1787 Male, age 76, left hemisphere 6.6
2764 Male, age 80, right hemisphere 5.8
2117 Female, age 91, right hemisphere 5.4
1938 Female, age 85, left hemisphere 4.9
2613 Female, age 94, left hemisphere 4.8
Hippocampus, CA1
nTPM: 10.7
1873 Female, age 85, both hemispheres 17.9
2749 Male, age 80, left hemisphere 15.3
2045 Male, age 76, both hemispheres 8.2
2527 Male, age 74, both hemispheres 7.7
2082 Female, age 91, right hemisphere 4.3
Hippocampus, CA2
nTPM: 8.8
1963 Male, age 80, left hemisphere 19.4
1892 Male, age 76, both hemispheres 8.7
2249 Male, age 74, both hemispheres 7.3
2437 Female, age 94, left hemisphere 7.3
1940 Female, age 85, left hemisphere 5.6
2113 Female, age 91, right hemisphere 4.6
Hippocampus, CA3
nTPM: 7.6
2861 Female, age 67, both hemispheres 11.3
1891 Female, age 85, both hemispheres 7.8
1867 Male, age 76, both hemispheres 7.6
2436 Male, age 74, both hemispheres 6.9
2620 Female, age 94, left hemisphere 6.7
2137 Male, age 80, left hemisphere 5.5
Parahippocampal cortex
nTPM: 6.0
2018 Male, age 76, both hemispheres 7.7
1933 Female, age 85, both hemispheres 7.0
1850 Male, age 80, both hemispheres 6.9
2622 Female, age 67, right hemisphere 6.6
2693 Female, age 94, both hemispheres 6.0
2250 Female, age 67, right hemisphere 5.9
2532 Female, age 72, left hemisphere 5.7
2245 Female, age 91, both hemispheres 5.2
2692 Male, age 74, both hemispheres 4.8
1990 Female, age 91, right hemisphere 4.3
Perirhinal gyrus
nTPM: 6.2
1841 Female, age 85, right hemisphere 8.9
1794 Male, age 80, right hemisphere 7.0
2521 Female, age 94, right hemisphere 5.5
2848 Male, age 76, right hemisphere 5.2
1847 Female, age 91, left hemisphere 4.7
Subiculum
nTPM: 6.0
2438 Female, age 94, left hemisphere 8.2
2042 Male, age 76, both hemispheres 6.8
2619 Male, age 74, both hemispheres 6.0
2729 Female, age 91, right hemisphere 5.4
1901 Male, age 80, both hemispheres 5.1
1977 Female, age 85, both hemispheres 4.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 12.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 12.3
Samples: 197

Max nTPM: 44.2
Min nTPM: 1.5
Std nTPM: 7.2
Median nTPM: 10.5
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 44.2
GTEX-1EH9U-0011-R1b-SM-CJI2B 60-69 years, male 33.6
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 33.0
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 32.0
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 29.7
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 29.6
GTEX-13X6I-0011-R1b-SM-5PNZC 60-69 years, male 29.3
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 27.8
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 26.2
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 25.9
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 25.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 28.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 28.9
FF:10169-103B7 60 years, female 40.8
FF:10153-102I9 76 years, female 17.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 5.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 5.1
Samples: 4

Max nTPM: 6.2
Min nTPM: 4.4
Sample A Female 6.2
Sample B Female 4.5
Sample C Male 4.4
Sample D Male 5.3
Entorhinal cortex
nTPM: 5.1
Samples: 4

Max nTPM: 6.6
Min nTPM: 4.4
Sample A Female 4.5
Sample B Female 6.6
Sample C Male 4.8
Sample D Male 4.4
Subiculum
nTPM: 3.9
Samples: 4

Max nTPM: 4.3
Min nTPM: 3.4
Sample A Female 3.4
Sample B Female 4.3
Sample C Male 3.7
Sample D Male 4.3
Ventral hippocampus
nTPM: 4.4
Samples: 4

Max nTPM: 5.5
Min nTPM: 3.6
Sample A Female 3.9
Sample B Female 4.4
Sample C Male 3.6
Sample D Male 5.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 30.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 9.0
Samples: 4

Max nTPM: 11.1
Min nTPM: 7.6
Sample A Male 8.7
Sample B Male 7.6
Sample C Female 11.1
Sample D Female 8.5
Hippocampal formation
nTPM: 30.9
Samples: 4

Max nTPM: 41.3
Min nTPM: 23.2
Sample A Male 25.2
Sample B Male 33.7
Sample C Female 41.3
Sample D Female 23.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.0
79750675 Antisense, RP_071204_02_D12, Mouse strain C57BL/6J (56 days, male) 2.3
649 Antisense, RP_Baylor_102894, Mouse strain C57BL/6J (56 days, male) 1.6

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