HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:64.7 nTPM
HPA:64.7 nTPM
GTEx:58.7 nTPM
FANTOM5:115.6 Scaled Tags Per Million
Pig:8.1 nTPM
Mouse:18.1 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 64.7
Sample id Sample description nTPM
Hippocampus
nTPM: 64.7
2529 Female, age 94, left hemisphere 68.5
2621 Female, age 67, right hemisphere 67.0
1855 Male, age 76, left hemisphere 65.9
2148 Female, age 91, left hemisphere 63.8
1911 Female, age 85, right hemisphere 61.7
1898 Male, age 80, left hemisphere 61.4
Dentate gyrus
nTPM: 63.0
2010 Male, age 76, both hemispheres 70.3
2530 Female, age 94, left hemisphere 65.2
2246 Female, age 85, both hemispheres 63.1
2531 Female, age 67, both hemispheres 62.4
2528 Male, age 74, both hemispheres 60.5
1927 Female, age 91, both hemispheres 56.2
Entorhinal gyrus
nTPM: 57.7
1787 Male, age 76, left hemisphere 60.6
2117 Female, age 91, right hemisphere 60.3
2764 Male, age 80, right hemisphere 57.6
1938 Female, age 85, left hemisphere 56.4
2686 Male, age 75, right hemisphere 56.4
2613 Female, age 94, left hemisphere 54.9
Hippocampus, CA1
nTPM: 62.9
2527 Male, age 74, both hemispheres 68.1
2045 Male, age 76, both hemispheres 65.9
2082 Female, age 91, right hemisphere 63.0
1873 Female, age 85, both hemispheres 62.8
2749 Male, age 80, left hemisphere 54.9
Hippocampus, CA2
nTPM: 60.0
2249 Male, age 74, both hemispheres 64.2
2437 Female, age 94, left hemisphere 61.4
2113 Female, age 91, right hemisphere 61.2
1940 Female, age 85, left hemisphere 61.0
1963 Male, age 80, left hemisphere 56.4
1892 Male, age 76, both hemispheres 55.8
Hippocampus, CA3
nTPM: 60.7
2620 Female, age 94, left hemisphere 64.7
2861 Female, age 67, both hemispheres 63.5
2436 Male, age 74, both hemispheres 60.6
1867 Male, age 76, both hemispheres 59.6
1891 Female, age 85, both hemispheres 58.6
2137 Male, age 80, left hemisphere 57.5
Parahippocampal cortex
nTPM: 59.2
2018 Male, age 76, both hemispheres 67.2
2245 Female, age 91, both hemispheres 62.4
2250 Female, age 67, right hemisphere 61.0
2692 Male, age 74, both hemispheres 60.6
2622 Female, age 67, right hemisphere 58.7
1933 Female, age 85, both hemispheres 58.0
2532 Female, age 72, left hemisphere 57.6
1850 Male, age 80, both hemispheres 56.4
1990 Female, age 91, right hemisphere 55.9
2693 Female, age 94, both hemispheres 53.8
Perirhinal gyrus
nTPM: 55.8
2521 Female, age 94, right hemisphere 57.1
2848 Male, age 76, right hemisphere 56.8
1847 Female, age 91, left hemisphere 55.5
1794 Male, age 80, right hemisphere 54.9
1841 Female, age 85, right hemisphere 54.9
Subiculum
nTPM: 62.4
2042 Male, age 76, both hemispheres 66.3
2438 Female, age 94, left hemisphere 66.1
2619 Male, age 74, both hemispheres 62.9
2729 Female, age 91, right hemisphere 62.0
1901 Male, age 80, both hemispheres 59.0
1977 Female, age 85, both hemispheres 58.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 58.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 58.7
Samples: 197

Max nTPM: 299.1
Min nTPM: 14.7
Std nTPM: 36.4
Median nTPM: 49.7
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 299.1
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 245.3
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 244.8
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 148.2
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 127.8
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 127.1
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 124.6
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 123.4
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 123.2
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 117.3
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 116.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 115.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 115.6
FF:10153-102I9 76 years, female 140.2
FF:10169-103B7 60 years, female 91.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 8.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 7.1
Samples: 4

Max nTPM: 13.2
Min nTPM: 2.4
Sample A Female 8.7
Sample B Female 3.9
Sample C Male 13.2
Sample D Male 2.4
Entorhinal cortex
nTPM: 6.2
Samples: 4

Max nTPM: 7.5
Min nTPM: 5.2
Sample A Female 7.5
Sample B Female 6.5
Sample C Male 5.4
Sample D Male 5.2
Subiculum
nTPM: 7.6
Samples: 4

Max nTPM: 11.6
Min nTPM: 3.6
Sample A Female 11.6
Sample B Female 3.6
Sample C Male 7.8
Sample D Male 7.5
Ventral hippocampus
nTPM: 8.1
Samples: 4

Max nTPM: 14.6
Min nTPM: 2.2
Sample A Female 14.6
Sample B Female 2.2
Sample C Male 11.5
Sample D Male 4.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 18.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 18.0
Samples: 4

Max nTPM: 19.0
Min nTPM: 17.5
Sample A Male 17.5
Sample B Male 19.0
Sample C Female 18.1
Sample D Female 17.5
Hippocampal formation
nTPM: 7.6
Samples: 4

Max nTPM: 10.7
Min nTPM: 5.3
Sample A Male 10.7
Sample B Male 5.3
Sample C Female 6.0
Sample D Female 8.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
631712 Antisense, RP_040907_01_B01, Mouse strain C57BL/6J (56 days, male) 0.0

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