HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:31.5 nTPM
HPA:31.5 nTPM
GTEx:23.2 nTPM
FANTOM5:17.6 Scaled Tags Per Million
Pig:7.9 nTPM
Mouse:56.0 nTPM
Allen mouse:0.6 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 31.5
Sample id Sample description nTPM
Hippocampus
nTPM: 31.5
2148 Female, age 91, left hemisphere 32.6
2529 Female, age 94, left hemisphere 32.0
1898 Male, age 80, left hemisphere 31.6
1855 Male, age 76, left hemisphere 31.4
2621 Female, age 67, right hemisphere 31.2
1911 Female, age 85, right hemisphere 30.1
Dentate gyrus
nTPM: 30.3
2530 Female, age 94, left hemisphere 31.9
2528 Male, age 74, both hemispheres 31.3
2531 Female, age 67, both hemispheres 30.4
2010 Male, age 76, both hemispheres 29.8
1927 Female, age 91, both hemispheres 29.4
2246 Female, age 85, both hemispheres 29.0
Entorhinal gyrus
nTPM: 30.9
2117 Female, age 91, right hemisphere 33.9
2686 Male, age 75, right hemisphere 32.6
2764 Male, age 80, right hemisphere 31.5
1787 Male, age 76, left hemisphere 29.6
2613 Female, age 94, left hemisphere 29.0
1938 Female, age 85, left hemisphere 28.4
Hippocampus, CA1
nTPM: 29.6
2527 Male, age 74, both hemispheres 30.2
2082 Female, age 91, right hemisphere 30.1
2749 Male, age 80, left hemisphere 30.1
2045 Male, age 76, both hemispheres 29.2
1873 Female, age 85, both hemispheres 28.4
Hippocampus, CA2
nTPM: 30.4
1963 Male, age 80, left hemisphere 31.6
1892 Male, age 76, both hemispheres 30.8
2437 Female, age 94, left hemisphere 30.7
2113 Female, age 91, right hemisphere 30.3
1940 Female, age 85, left hemisphere 29.8
2249 Male, age 74, both hemispheres 28.9
Hippocampus, CA3
nTPM: 31.2
2861 Female, age 67, both hemispheres 34.9
1891 Female, age 85, both hemispheres 31.6
1867 Male, age 76, both hemispheres 31.0
2137 Male, age 80, left hemisphere 30.2
2620 Female, age 94, left hemisphere 29.9
2436 Male, age 74, both hemispheres 29.7
Parahippocampal cortex
nTPM: 29.7
2692 Male, age 74, both hemispheres 32.2
2622 Female, age 67, right hemisphere 31.4
1990 Female, age 91, right hemisphere 30.0
2245 Female, age 91, both hemispheres 29.9
2532 Female, age 72, left hemisphere 29.4
2018 Male, age 76, both hemispheres 29.3
1850 Male, age 80, both hemispheres 29.2
2250 Female, age 67, right hemisphere 29.0
2693 Female, age 94, both hemispheres 28.4
1933 Female, age 85, both hemispheres 28.2
Perirhinal gyrus
nTPM: 28.4
1794 Male, age 80, right hemisphere 29.1
2521 Female, age 94, right hemisphere 29.0
1847 Female, age 91, left hemisphere 28.7
1841 Female, age 85, right hemisphere 28.2
2848 Male, age 76, right hemisphere 27.0
Subiculum
nTPM: 30.4
2619 Male, age 74, both hemispheres 31.5
2729 Female, age 91, right hemisphere 31.0
2042 Male, age 76, both hemispheres 30.8
1901 Male, age 80, both hemispheres 30.7
1977 Female, age 85, both hemispheres 29.2
2438 Female, age 94, left hemisphere 28.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 23.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 23.2
Samples: 197

Max nTPM: 46.3
Min nTPM: 13.8
Std nTPM: 4.7
Median nTPM: 22.7
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 46.3
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 43.8
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 36.6
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 34.8
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 34.7
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 33.4
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 32.3
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 32.2
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 31.8
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 30.3
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 30.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 17.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 17.6
FF:10153-102I9 76 years, female 18.4
FF:10169-103B7 60 years, female 16.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 7.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 7.0
Samples: 4

Max nTPM: 8.6
Min nTPM: 5.0
Sample A Female 8.6
Sample B Female 6.5
Sample C Male 7.8
Sample D Male 5.0
Entorhinal cortex
nTPM: 7.9
Samples: 4

Max nTPM: 9.2
Min nTPM: 7.1
Sample A Female 8.0
Sample B Female 7.1
Sample C Male 9.2
Sample D Male 7.1
Subiculum
nTPM: 6.6
Samples: 4

Max nTPM: 8.7
Min nTPM: 5.4
Sample A Female 8.7
Sample B Female 5.4
Sample C Male 6.6
Sample D Male 5.7
Ventral hippocampus
nTPM: 7.2
Samples: 4

Max nTPM: 9.7
Min nTPM: 5.6
Sample A Female 6.7
Sample B Female 5.6
Sample C Male 9.7
Sample D Male 6.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 56.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 42.9
Samples: 4

Max nTPM: 48.6
Min nTPM: 38.3
Sample A Male 38.4
Sample B Male 48.6
Sample C Female 46.4
Sample D Female 38.3
Hippocampal formation
nTPM: 56.0
Samples: 4

Max nTPM: 67.4
Min nTPM: 42.7
Sample A Male 67.4
Sample B Male 42.7
Sample C Female 61.3
Sample D Female 52.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.6
112647750 Antisense, RP_110421_01_A09, Mouse strain C57BL/6J (56 days, male) 0.6
100144164 Antisense, RP_110421_01_A09, Mouse strain C57BL/6J (56 days, male) 0.4

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