HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:197.7 nTPM
HPA:197.7 nTPM
GTEx:161.6 nTPM
FANTOM5:96.2 Scaled Tags Per Million
Pig:33.4 nTPM
Mouse:33.0 nTPM
Allen mouse:1.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA058997
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 197.7
Sample id Sample description nTPM
Hippocampus
nTPM: 173.6
1911 Female, age 85, right hemisphere 188.0
2529 Female, age 94, left hemisphere 186.0
1898 Male, age 80, left hemisphere 173.7
2621 Female, age 67, right hemisphere 169.0
2148 Female, age 91, left hemisphere 165.3
1855 Male, age 76, left hemisphere 159.7
Dentate gyrus
nTPM: 177.6
2530 Female, age 94, left hemisphere 213.6
2010 Male, age 76, both hemispheres 184.2
2528 Male, age 74, both hemispheres 174.3
2531 Female, age 67, both hemispheres 169.3
2246 Female, age 85, both hemispheres 168.1
1927 Female, age 91, both hemispheres 156.1
Entorhinal gyrus
nTPM: 178.0
2117 Female, age 91, right hemisphere 215.5
2764 Male, age 80, right hemisphere 184.9
2686 Male, age 75, right hemisphere 180.8
1938 Female, age 85, left hemisphere 164.0
1787 Male, age 76, left hemisphere 163.0
2613 Female, age 94, left hemisphere 160.1
Hippocampus, CA1
nTPM: 162.7
2082 Female, age 91, right hemisphere 178.0
1873 Female, age 85, both hemispheres 169.7
2527 Male, age 74, both hemispheres 166.8
2045 Male, age 76, both hemispheres 151.3
2749 Male, age 80, left hemisphere 147.5
Hippocampus, CA2
nTPM: 177.2
1963 Male, age 80, left hemisphere 189.8
2113 Female, age 91, right hemisphere 181.9
1940 Female, age 85, left hemisphere 178.7
2437 Female, age 94, left hemisphere 178.6
2249 Male, age 74, both hemispheres 177.9
1892 Male, age 76, both hemispheres 156.1
Hippocampus, CA3
nTPM: 160.2
1891 Female, age 85, both hemispheres 205.1
1867 Male, age 76, both hemispheres 169.6
2436 Male, age 74, both hemispheres 152.5
2861 Female, age 67, both hemispheres 148.8
2137 Male, age 80, left hemisphere 143.7
2620 Female, age 94, left hemisphere 141.6
Parahippocampal cortex
nTPM: 165.6
2692 Male, age 74, both hemispheres 186.4
1990 Female, age 91, right hemisphere 182.0
2018 Male, age 76, both hemispheres 179.1
2532 Female, age 72, left hemisphere 176.1
1933 Female, age 85, both hemispheres 163.4
1850 Male, age 80, both hemispheres 163.1
2245 Female, age 91, both hemispheres 162.8
2622 Female, age 67, right hemisphere 149.0
2250 Female, age 67, right hemisphere 147.5
2693 Female, age 94, both hemispheres 147.0
Perirhinal gyrus
nTPM: 150.7
1847 Female, age 91, left hemisphere 152.0
1794 Male, age 80, right hemisphere 151.8
2848 Male, age 76, right hemisphere 151.8
2521 Female, age 94, right hemisphere 150.8
1841 Female, age 85, right hemisphere 146.9
Subiculum
nTPM: 197.7
2042 Male, age 76, both hemispheres 231.8
1901 Male, age 80, both hemispheres 215.9
1977 Female, age 85, both hemispheres 191.5
2438 Female, age 94, left hemisphere 190.7
2729 Female, age 91, right hemisphere 181.9
2619 Male, age 74, both hemispheres 174.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 161.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 161.6
Samples: 197

Max nTPM: 408.0
Min nTPM: 32.6
Std nTPM: 77.2
Median nTPM: 145.9
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 408.0
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 405.2
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 401.2
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 379.1
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 377.2
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 361.3
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 333.9
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 311.9
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 310.2
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 309.3
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 306.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 96.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 96.2
FF:10153-102I9 76 years, female 143.3
FF:10169-103B7 60 years, female 49.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 33.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 33.4
Samples: 4

Max nTPM: 39.5
Min nTPM: 21.4
Sample A Female 36.3
Sample B Female 36.4
Sample C Male 39.5
Sample D Male 21.4
Entorhinal cortex
nTPM: 17.1
Samples: 4

Max nTPM: 21.7
Min nTPM: 13.8
Sample A Female 13.8
Sample B Female 21.7
Sample C Male 17.3
Sample D Male 15.6
Subiculum
nTPM: 19.4
Samples: 4

Max nTPM: 23.1
Min nTPM: 16.3
Sample A Female 20.6
Sample B Female 23.1
Sample C Male 17.6
Sample D Male 16.3
Ventral hippocampus
nTPM: 28.1
Samples: 4

Max nTPM: 30.2
Min nTPM: 25.9
Sample A Female 29.2
Sample B Female 25.9
Sample C Male 30.2
Sample D Male 26.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 33.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 28.6
Samples: 4

Max nTPM: 31.3
Min nTPM: 26.1
Sample A Male 30.8
Sample B Male 26.2
Sample C Female 31.3
Sample D Female 26.1
Hippocampal formation
nTPM: 33.1
Samples: 4

Max nTPM: 37.8
Min nTPM: 26.6
Sample A Male 32.0
Sample B Male 26.6
Sample C Female 35.8
Sample D Female 37.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.7
112650769 Antisense, RP_071128_04_A08, Mouse strain C57BL/6J (56 days, male) 1.8
2302 Antisense, RP_040604_02_B07, Mouse strain C57BL/6J (56 days, male) 1.6

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The Human Protein Atlas

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