HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:7.6 nTPM
HPA:7.6 nTPM
GTEx:27.0 nTPM
FANTOM5:34.8 Scaled Tags Per Million
Pig:38.2 nTPM
Mouse:47.8 nTPM
Allen mouse:13.7 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPUS - Antibody stainingi
Antibody HPA051159
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 7.6
Sample id Sample description nTPM
Hippocampus
nTPM: 7.6
1898 Male, age 80, left hemisphere 11.8
2148 Female, age 91, left hemisphere 11.6
1911 Female, age 85, right hemisphere 7.8
1855 Male, age 76, left hemisphere 7.6
2529 Female, age 94, left hemisphere 5.0
2621 Female, age 67, right hemisphere 1.7
Dentate gyrus
nTPM: 7.0
2531 Female, age 67, both hemispheres 11.4
2528 Male, age 74, both hemispheres 11.3
2010 Male, age 76, both hemispheres 10.4
1927 Female, age 91, both hemispheres 5.3
2246 Female, age 85, both hemispheres 2.8
2530 Female, age 94, left hemisphere 0.8
Entorhinal gyrus
nTPM: 4.9
2117 Female, age 91, right hemisphere 10.6
2764 Male, age 80, right hemisphere 10.5
1787 Male, age 76, left hemisphere 5.8
2686 Male, age 75, right hemisphere 1.8
1938 Female, age 85, left hemisphere 0.4
2613 Female, age 94, left hemisphere 0.0
Hippocampus, CA1
nTPM: 6.8
2045 Male, age 76, both hemispheres 12.6
2749 Male, age 80, left hemisphere 8.6
1873 Female, age 85, both hemispheres 8.1
2527 Male, age 74, both hemispheres 5.0
2082 Female, age 91, right hemisphere 0.0
Hippocampus, CA2
nTPM: 2.2
1963 Male, age 80, left hemisphere 8.3
2249 Male, age 74, both hemispheres 4.9
1892 Male, age 76, both hemispheres 0.0
1940 Female, age 85, left hemisphere 0.0
2113 Female, age 91, right hemisphere 0.0
2437 Female, age 94, left hemisphere 0.0
Hippocampus, CA3
nTPM: 4.9
2620 Female, age 94, left hemisphere 15.4
2861 Female, age 67, both hemispheres 7.3
1891 Female, age 85, both hemispheres 4.9
1867 Male, age 76, both hemispheres 1.5
2137 Male, age 80, left hemisphere 0.5
2436 Male, age 74, both hemispheres 0.0
Parahippocampal cortex
nTPM: 2.4
1933 Female, age 85, both hemispheres 6.5
2245 Female, age 91, both hemispheres 4.8
2532 Female, age 72, left hemisphere 4.4
2018 Male, age 76, both hemispheres 4.1
2693 Female, age 94, both hemispheres 1.1
1990 Female, age 91, right hemisphere 1.0
2250 Female, age 67, right hemisphere 1.0
2622 Female, age 67, right hemisphere 0.7
1850 Male, age 80, both hemispheres 0.5
2692 Male, age 74, both hemispheres 0.0
Perirhinal gyrus
nTPM: 3.5
1794 Male, age 80, right hemisphere 11.0
2521 Female, age 94, right hemisphere 5.3
1841 Female, age 85, right hemisphere 1.4
1847 Female, age 91, left hemisphere 0.0
2848 Male, age 76, right hemisphere 0.0
Subiculum
nTPM: 5.1
2729 Female, age 91, right hemisphere 14.2
1977 Female, age 85, both hemispheres 8.6
1901 Male, age 80, both hemispheres 3.8
2619 Male, age 74, both hemispheres 2.7
2042 Male, age 76, both hemispheres 1.1
2438 Female, age 94, left hemisphere 0.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 27.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 27.0
Samples: 197

Max nTPM: 46.5
Min nTPM: 8.5
Std nTPM: 6.5
Median nTPM: 25.7
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 46.5
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 46.0
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 45.0
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 42.6
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 42.2
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 41.5
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 41.5
GTEX-ZAB4-0011-R1a-SM-4RGNO 40-49 years, male 40.7
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 40.5
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 40.4
GTEX-1A3MX-0011-R1b-SM-7P8PH 60-69 years, male 40.4
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 34.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 34.8
FF:10153-102I9 76 years, female 40.3
FF:10169-103B7 60 years, female 29.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 38.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 38.2
Samples: 4

Max nTPM: 49.1
Min nTPM: 22.8
Sample A Female 49.1
Sample B Female 45.1
Sample C Male 22.8
Sample D Male 35.9
Entorhinal cortex
nTPM: 27.0
Samples: 4

Max nTPM: 39.7
Min nTPM: 18.1
Sample A Female 22.9
Sample B Female 27.3
Sample C Male 39.7
Sample D Male 18.1
Subiculum
nTPM: 32.5
Samples: 4

Max nTPM: 49.9
Min nTPM: 20.8
Sample A Female 49.9
Sample B Female 32.7
Sample C Male 26.4
Sample D Male 20.8
Ventral hippocampus
nTPM: 37.8
Samples: 4

Max nTPM: 46.2
Min nTPM: 25.5
Sample A Female 40.2
Sample B Female 39.4
Sample C Male 46.2
Sample D Male 25.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 47.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 30.0
Samples: 4

Max nTPM: 32.6
Min nTPM: 25.7
Sample A Male 31.5
Sample B Male 25.7
Sample C Female 32.6
Sample D Female 30.1
Hippocampal formation
nTPM: 47.8
Samples: 4

Max nTPM: 61.3
Min nTPM: 38.1
Sample A Male 38.1
Sample B Male 53.2
Sample C Female 61.3
Sample D Female 38.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 13.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 13.7
69288518 Antisense, RP_050407_01_A08, Mouse strain C57BL/6J (56 days, male) 13.7

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.