HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:103.0 nTPM
HPA:103.0 nTPM
GTEx:110.6 nTPM
FANTOM5:120.2 Scaled Tags Per Million
Pig:359.2 nTPM
Mouse:263.2 nTPM
Allen mouse:8.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA052606
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 103.0
Sample id Sample description nTPM
Hippocampus
nTPM: 96.1
1898 Male, age 80, left hemisphere 110.7
1855 Male, age 76, left hemisphere 110.4
2621 Female, age 67, right hemisphere 103.1
2148 Female, age 91, left hemisphere 94.9
2529 Female, age 94, left hemisphere 80.9
1911 Female, age 85, right hemisphere 76.8
Dentate gyrus
nTPM: 94.5
2530 Female, age 94, left hemisphere 117.7
2010 Male, age 76, both hemispheres 106.3
1927 Female, age 91, both hemispheres 101.0
2246 Female, age 85, both hemispheres 87.1
2531 Female, age 67, both hemispheres 81.0
2528 Male, age 74, both hemispheres 74.0
Entorhinal gyrus
nTPM: 92.6
2613 Female, age 94, left hemisphere 104.6
1787 Male, age 76, left hemisphere 104.0
2764 Male, age 80, right hemisphere 99.4
1938 Female, age 85, left hemisphere 92.1
2686 Male, age 75, right hemisphere 87.0
2117 Female, age 91, right hemisphere 68.6
Hippocampus, CA1
nTPM: 97.6
2749 Male, age 80, left hemisphere 157.0
1873 Female, age 85, both hemispheres 109.6
2527 Male, age 74, both hemispheres 85.2
2045 Male, age 76, both hemispheres 73.1
2082 Female, age 91, right hemisphere 63.2
Hippocampus, CA2
nTPM: 99.2
1963 Male, age 80, left hemisphere 152.7
1892 Male, age 76, both hemispheres 135.7
2437 Female, age 94, left hemisphere 92.4
1940 Female, age 85, left hemisphere 79.0
2249 Male, age 74, both hemispheres 68.3
2113 Female, age 91, right hemisphere 66.8
Hippocampus, CA3
nTPM: 91.3
2861 Female, age 67, both hemispheres 115.6
2137 Male, age 80, left hemisphere 106.6
1867 Male, age 76, both hemispheres 99.7
2620 Female, age 94, left hemisphere 82.2
1891 Female, age 85, both hemispheres 76.2
2436 Male, age 74, both hemispheres 67.6
Parahippocampal cortex
nTPM: 93.5
2532 Female, age 72, left hemisphere 114.4
1850 Male, age 80, both hemispheres 109.3
2622 Female, age 67, right hemisphere 103.2
1933 Female, age 85, both hemispheres 96.1
2245 Female, age 91, both hemispheres 90.3
2250 Female, age 67, right hemisphere 87.8
2692 Male, age 74, both hemispheres 87.8
2693 Female, age 94, both hemispheres 85.4
1990 Female, age 91, right hemisphere 81.6
2018 Male, age 76, both hemispheres 79.5
Perirhinal gyrus
nTPM: 103.0
1794 Male, age 80, right hemisphere 108.9
1847 Female, age 91, left hemisphere 107.0
2521 Female, age 94, right hemisphere 100.9
1841 Female, age 85, right hemisphere 100.8
2848 Male, age 76, right hemisphere 97.3
Subiculum
nTPM: 78.2
1901 Male, age 80, both hemispheres 83.3
2438 Female, age 94, left hemisphere 83.0
2619 Male, age 74, both hemispheres 80.5
1977 Female, age 85, both hemispheres 80.2
2729 Female, age 91, right hemisphere 72.6
2042 Male, age 76, both hemispheres 69.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 110.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 110.6
Samples: 197

Max nTPM: 297.7
Min nTPM: 22.1
Std nTPM: 44.5
Median nTPM: 101.6
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 297.7
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 258.8
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 240.1
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 232.2
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 207.4
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 206.9
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 203.0
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 200.7
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 199.1
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 198.9
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 193.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 120.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 120.2
FF:10169-103B7 60 years, female 128.7
FF:10153-102I9 76 years, female 111.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 359.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 233.8
Samples: 4

Max nTPM: 296.9
Min nTPM: 152.9
Sample A Female 296.9
Sample B Female 215.2
Sample C Male 270.0
Sample D Male 152.9
Entorhinal cortex
nTPM: 359.2
Samples: 4

Max nTPM: 437.5
Min nTPM: 309.1
Sample A Female 319.0
Sample B Female 371.3
Sample C Male 437.5
Sample D Male 309.1
Subiculum
nTPM: 278.6
Samples: 4

Max nTPM: 371.1
Min nTPM: 236.5
Sample A Female 371.1
Sample B Female 264.3
Sample C Male 236.5
Sample D Male 242.3
Ventral hippocampus
nTPM: 213.0
Samples: 4

Max nTPM: 247.9
Min nTPM: 174.1
Sample A Female 197.1
Sample B Female 174.1
Sample C Male 247.9
Sample D Male 233.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 263.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 263.2
Samples: 4

Max nTPM: 281.5
Min nTPM: 253.9
Sample A Male 253.9
Sample B Male 255.7
Sample C Female 261.8
Sample D Female 281.5
Hippocampal formation
nTPM: 245.9
Samples: 4

Max nTPM: 262.2
Min nTPM: 231.3
Sample A Male 262.2
Sample B Male 237.1
Sample C Female 252.8
Sample D Female 231.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 8.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 8.2
71764320 Antisense, RP_050921_03_E08, Mouse strain C57BL/6J (56 days, male) 8.2

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