HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:40.7 nTPM
HPA:40.7 nTPM
GTEx:35.6 nTPM
FANTOM5:50.0 Scaled Tags Per Million
Pig:19.7 nTPM
Mouse:17.9 nTPM
Allen mouse:3.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA008423
Glial cells High
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 40.7
Sample id Sample description nTPM
Hippocampus
nTPM: 35.6
2621 Female, age 67, right hemisphere 38.4
2529 Female, age 94, left hemisphere 38.1
2148 Female, age 91, left hemisphere 37.9
1855 Male, age 76, left hemisphere 36.5
1911 Female, age 85, right hemisphere 32.7
1898 Male, age 80, left hemisphere 30.2
Dentate gyrus
nTPM: 32.8
2246 Female, age 85, both hemispheres 37.3
2530 Female, age 94, left hemisphere 36.2
2531 Female, age 67, both hemispheres 34.5
2010 Male, age 76, both hemispheres 31.9
2528 Male, age 74, both hemispheres 28.4
1927 Female, age 91, both hemispheres 28.1
Entorhinal gyrus
nTPM: 40.7
2686 Male, age 75, right hemisphere 48.3
2613 Female, age 94, left hemisphere 41.9
2117 Female, age 91, right hemisphere 41.7
1787 Male, age 76, left hemisphere 39.4
1938 Female, age 85, left hemisphere 37.0
2764 Male, age 80, right hemisphere 35.7
Hippocampus, CA1
nTPM: 29.7
2045 Male, age 76, both hemispheres 34.8
2527 Male, age 74, both hemispheres 32.2
1873 Female, age 85, both hemispheres 29.7
2082 Female, age 91, right hemisphere 28.8
2749 Male, age 80, left hemisphere 22.8
Hippocampus, CA2
nTPM: 30.2
2437 Female, age 94, left hemisphere 37.3
2113 Female, age 91, right hemisphere 31.9
1940 Female, age 85, left hemisphere 30.9
1892 Male, age 76, both hemispheres 30.0
1963 Male, age 80, left hemisphere 26.8
2249 Male, age 74, both hemispheres 24.4
Hippocampus, CA3
nTPM: 33.3
2861 Female, age 67, both hemispheres 50.1
2620 Female, age 94, left hemisphere 36.8
1867 Male, age 76, both hemispheres 31.1
2436 Male, age 74, both hemispheres 29.7
1891 Female, age 85, both hemispheres 27.1
2137 Male, age 80, left hemisphere 24.9
Parahippocampal cortex
nTPM: 36.8
2622 Female, age 67, right hemisphere 51.1
2692 Male, age 74, both hemispheres 41.2
2693 Female, age 94, both hemispheres 39.7
2245 Female, age 91, both hemispheres 36.8
2532 Female, age 72, left hemisphere 36.1
1850 Male, age 80, both hemispheres 35.5
1933 Female, age 85, both hemispheres 34.4
2250 Female, age 67, right hemisphere 33.2
2018 Male, age 76, both hemispheres 30.7
1990 Female, age 91, right hemisphere 29.3
Perirhinal gyrus
nTPM: 38.2
1794 Male, age 80, right hemisphere 42.6
2521 Female, age 94, right hemisphere 40.9
1847 Female, age 91, left hemisphere 37.8
2848 Male, age 76, right hemisphere 36.2
1841 Female, age 85, right hemisphere 33.5
Subiculum
nTPM: 34.0
2438 Female, age 94, left hemisphere 44.9
2619 Male, age 74, both hemispheres 39.1
2729 Female, age 91, right hemisphere 33.1
1977 Female, age 85, both hemispheres 31.0
1901 Male, age 80, both hemispheres 28.4
2042 Male, age 76, both hemispheres 27.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 35.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 35.6
Samples: 197

Max nTPM: 81.3
Min nTPM: 8.3
Std nTPM: 12.3
Median nTPM: 34.8
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 81.3
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 78.5
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 74.9
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 73.0
GTEX-13FHO-0011-R1b-SM-5KLZG 60-69 years, male 69.5
GTEX-ZDXO-0011-R1a-SM-4WKF4 60-69 years, male 65.3
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 65.0
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 61.7
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 59.7
GTEX-13SLW-0011-R1a-SM-5S2W7 70-79 years, male 59.4
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 58.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 50.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 50.0
FF:10153-102I9 76 years, female 60.3
FF:10169-103B7 60 years, female 39.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 19.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 17.8
Samples: 4

Max nTPM: 20.2
Min nTPM: 12.8
Sample A Female 19.0
Sample B Female 19.2
Sample C Male 20.2
Sample D Male 12.8
Entorhinal cortex
nTPM: 17.9
Samples: 4

Max nTPM: 22.2
Min nTPM: 14.8
Sample A Female 19.6
Sample B Female 14.8
Sample C Male 22.2
Sample D Male 15.0
Subiculum
nTPM: 19.7
Samples: 4

Max nTPM: 22.6
Min nTPM: 16.7
Sample A Female 22.6
Sample B Female 18.0
Sample C Male 21.4
Sample D Male 16.7
Ventral hippocampus
nTPM: 18.9
Samples: 4

Max nTPM: 23.8
Min nTPM: 14.6
Sample A Female 14.6
Sample B Female 15.1
Sample C Male 23.8
Sample D Male 22.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 17.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 17.9
Samples: 4

Max nTPM: 20.9
Min nTPM: 16.4
Sample A Male 17.0
Sample B Male 17.4
Sample C Female 16.4
Sample D Female 20.9
Hippocampal formation
nTPM: 15.0
Samples: 4

Max nTPM: 17.0
Min nTPM: 12.5
Sample A Male 12.5
Sample B Male 16.6
Sample C Female 13.7
Sample D Female 17.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.9
71656916 Antisense, RP_050927_04_E07, Mouse strain C57BL/6J (56 days, male) 3.9

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