We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
RPS27
SECTIONS
  • TISSUE
  • BRAIN
  • SINGLE CELL TYPE
  • TISSUE CELL TYPE
  • PATHOLOGY
  • DISEASE
  • IMMUNE CELL
  • BLOOD PROTEIN
  • SUBCELLULAR
  • CELL LINE
  • STRUCTURE
  • METABOLIC
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
  • SARS-COV-2
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Patient ID
Tissue
Category
Cluster
Reliability
Brain region
Category
Brain region
Category
Brain region
Category
Reliability
Cell type
Category
Cluster
Tissue
Cell type
Enrichment
Cancer
Prognosis
Cancer
Category
Cell type
Category
Cell lineage
Category
Cluster
Annotation
Disease
Location
Searches
Location
Cell line
Type
Phase
Reliability
Cancer type
Category
Cluster
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Protein structure
In atlas
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • TISSUE CELL

  • PATHOLOGY

  • DISEASE

  • IMMUNE

  • BLOOD

  • SUBCELL

  • CELL LINE

  • STRUCTURE

  • METABOLIC

  • RPS27
BRAIN AMYGDALA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN PONS SPINAL CORD THALAMUS WHITE MATTER
Brain proteome
Amygdala
AMYGDALA - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:3594.8 nTPM
HPA:3594.8 nTPM
GTEx:3504.9 nTPM
FANTOM5:284.1 Scaled Tags Per Million

AMYGDALA - Annotated protein expression
Pending normal tissue analysis

AMYGDALA - HPA Brain RNA-seq
Max nTPM 3594.8
Sample id Sample description nTPM
Amygdala
nTPM: 3594.8
2695 Female, age 67, right hemisphere 3678.0
2514 Male, age 75, right hemisphere 3607.8
2517 Female, age 94, left hemisphere 3585.4
2814 Male, age 76, right hemisphere 3558.1
1987 Female, age 91, left hemisphere 3544.9
Basal amygdala
nTPM: 3584.9
2827 Female, age 67, right hemisphere 3654.7
2609 Male, age 75, right hemisphere 3610.1
2243 Female, age 91, right hemisphere 3576.5
2685 Female, age 94, left hemisphere 3561.8
1955 Male, age 76, both hemispheres 3554.1
2110 Male, age 80, left hemisphere 3551.9
Central amygdala
nTPM: 3584.5
2826 Female, age 94, left hemisphere 3671.5
2515 Male, age 75, right hemisphere 3572.7
2239 Male, age 80, left hemisphere 3569.5
2701 Female, age 91, right hemisphere 3566.2
1905 Male, age 76, both hemispheres 3542.9
Corticomedial amygdala
nTPM: 3584.6
2535 Female, age 67, right hemisphere 3623.2
2240 Male, age 76, both hemispheres 3618.4
2429 Female, age 94, left hemisphere 3581.9
2242 Female, age 91, right hemisphere 3575.2
2428 Male, age 75, right hemisphere 3566.6
2829 Male, age 80, left hemisphere 3542.6
Lateral amygdala
nTPM: 3590.8
2534 Female, age 94, left hemisphere 3653.0
2830 Female, age 67, right hemisphere 3641.2
2516 Male, age 75, right hemisphere 3622.2
2256 Male, age 80, left hemisphere 3564.1
2255 Female, age 91, right hemisphere 3538.8
1883 Male, age 76, both hemispheres 3525.4
Stria terminalis, bed nucleus
nTPM: 3547.5
2201 Male, age 74, unknown 3559.4
1974 Female, age 91, both hemispheres 3554.2
2486 Female, age 94, both hemispheres 3528.9

AMYGDALA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 3504.9
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 3504.9
Samples: 152

Max nTPM: 11559.1
Min nTPM: 1358.8
Std nTPM: 1722.6
Median nTPM: 3042.7
GTEX-14JFF-0011-R4a-SM-5ZZV5 60-69 years, male 11559.1
GTEX-11ZU8-0011-R4a-SM-5BC6Y 60-69 years, male 9664.5
GTEX-1H2FU-0011-R4a-SM-CL551 60-69 years, female 9237.6
GTEX-147GR-0011-R4a-SM-5S2V2 60-69 years, male 8733.6
GTEX-14JG1-0011-R4b-SM-62LEB 40-49 years, male 8114.5
GTEX-1H1CY-0011-R4b-SM-CJI3G 60-69 years, female 7761.6
GTEX-1JJEA-0011-R4a-SM-EXUTC 60-69 years, male 6887.5
GTEX-17HG3-0011-R4a-SM-7IGLL 30-39 years, female 6726.7
GTEX-1GF9W-0011-R4a-SM-CE6RH 60-69 years, male 6706.8
GTEX-12WSH-0011-R4a-SM-5GU6K 50-59 years, male 6663.9
GTEX-1GZ4I-0011-R4a-SM-9QEI9 50-59 years, male 6449.7
GTEX-183WM-0011-R4a-SM-7LG6S 70-79 years, female 6312.6
GTEX-145MI-0011-R4b-SM-5PNZH 60-69 years, female 6207.4
GTEX-1CB4G-0011-R4b-SM-CJI28 60-69 years, male 6062.0
GTEX-14E7W-0011-R4b-SM-62LEA 70-79 years, male 5896.8
GTEX-ZE9C-0011-R4a-SM-4WKH6 60-69 years, male 5767.5
GTEX-1F75A-0011-R4a-SM-ARL8J 50-59 years, male 5633.8
GTEX-1JMQJ-0011-R4b-SM-EXUT8 50-59 years, male 5531.0
GTEX-1JN6P-0011-R4a-SM-EZ6MS 60-69 years, male 5339.9
GTEX-1C6VR-0011-R4b-SM-9QEGZ 60-69 years, male 5290.0
GTEX-QVUS-0011-R4A-SM-3GAE7 60-69 years, female 5278.1
GTEX-12ZZW-0011-R4a-SM-5DUX9 50-59 years, male 5138.8
GTEX-OHPN-0011-R4A-SM-2I5FD 60-69 years, female 4944.5
GTEX-17EVQ-0011-R4b-SM-7LT94 70-79 years, male 4849.0
GTEX-1H23P-0011-R4b-SM-CL54R 60-69 years, male 4835.7
GTEX-1C6WA-0011-R4a-SM-9QEH2 60-69 years, male 4790.2
GTEX-1J8Q2-0011-R4a-SM-ADEHA 60-69 years, male 4781.2
GTEX-Y8DK-0011-R4A-SM-EXUR1 60-69 years, male 4642.5
GTEX-13JVG-0011-R4a-SM-5MR4C 60-69 years, male 4599.4
GTEX-12ZZZ-0011-R4b-SM-5DUV7 60-69 years, male 4566.6
GTEX-1I1GR-0011-R4a-SM-CMKHC 60-69 years, male 4546.0
GTEX-13OW6-0011-R4a-SM-5O9DX 50-59 years, male 4466.9
GTEX-1H1DG-0011-R4a-SM-CE6RQ 70-79 years, male 4359.3
GTEX-13OVL-0011-R4b-SM-5L3HV 50-59 years, male 4268.8
GTEX-15DDE-0011-R4b-SM-7KULI 50-59 years, female 4187.4
GTEX-1LVAO-0011-R4a-SM-EXURO 60-69 years, male 4187.1
GTEX-18464-0011-R4a-SM-7LG6T 50-59 years, male 4163.6
GTEX-139T8-0011-R4a-SM-5HL54 60-69 years, male 4144.7
GTEX-1E1VI-0011-R4b-SM-9QEHV 50-59 years, male 4109.1
GTEX-1J1OQ-0011-R4a-SM-D4P2A 40-49 years, female 3996.9
GTEX-UTHO-0011-R4A-SM-3GIJP 60-69 years, male 3959.0
GTEX-1ICLZ-0011-R4a-SM-CMKHL 60-69 years, male 3918.2
GTEX-17F97-0011-R4b-SM-7KFS2 50-59 years, male 3906.8
GTEX-13NYB-0011-R4b-SM-9QEGJ 40-49 years, male 3886.7
GTEX-1EX96-0011-R4a-SM-ARU82 50-59 years, male 3873.6
GTEX-13CZV-0011-R4b-SM-5J2NY 60-69 years, male 3754.5
GTEX-1J8EW-0011-R4b-SM-ARU89 60-69 years, female 3733.1
GTEX-13FLV-0011-R4a-SM-5LZYU 50-59 years, male 3717.4
GTEX-13PVQ-0011-R4a-SM-5O9CT 50-59 years, male 3641.9
GTEX-11TTK-0011-R4a-SM-DNZZU 60-69 years, female 3638.2
GTEX-1F6IF-0011-R4b-SM-CKZNJ 60-69 years, male 3636.6
GTEX-1N2DW-0011-R4b-SM-EZ6MD 50-59 years, male 3584.0
GTEX-13SLX-0011-R4a-SM-5O9BJ 50-59 years, female 3575.2
GTEX-1CB4J-0011-R4b-SM-9WG5P 60-69 years, male 3556.1
GTEX-11ONC-0011-R4b-SM-DO93H 60-69 years, male 3556.0
GTEX-1N2EE-0011-R4a-SM-EXOII 60-69 years, male 3551.4
GTEX-14DAQ-0011-R4a-SM-5YYAI 60-69 years, female 3522.9
GTEX-1GTWX-0011-R4a-SM-C1YQI 60-69 years, male 3513.8
GTEX-13OVH-0011-R4a-SM-5KM3W 70-79 years, male 3488.8
GTEX-13QIC-0011-R4a-SM-5PNX8 60-69 years, female 3461.3
GTEX-144GL-0011-R4a-SM-5PNUI 50-59 years, male 3457.4
GTEX-1LSVX-0011-R4b-SM-EXURP 60-69 years, male 3444.7
GTEX-P44H-0011-R4A-SM-2XCEW 40-49 years, male 3438.0
GTEX-12WSA-0011-R4a-SM-57WB7 60-69 years, male 3410.1
GTEX-11ZVC-0011-R4a-SM-5BC6Z 50-59 years, female 3404.1
GTEX-1HBPI-0011-R4a-SM-CJI3K 50-59 years, male 3395.3
GTEX-1H1ZS-0011-R4b-SM-CKZO7 70-79 years, male 3339.5
GTEX-14PJM-0011-R4a-SM-5YYAS 50-59 years, female 3323.0
GTEX-RNOR-0011-R4A-SM-3GAD3 50-59 years, female 3295.3
GTEX-13OW7-0011-R4b-SM-5O9CX 50-59 years, male 3280.6
GTEX-NL4W-0011-R4a-SM-2I5GZ 50-59 years, male 3267.1
GTEX-QMR6-0011-R4A-SM-32PKU 50-59 years, male 3215.5
GTEX-11PRG-0011-R4a-SM-DNZZR 50-59 years, male 3200.5
GTEX-1445S-0011-R4a-SM-5PNWN 60-69 years, male 3145.9
GTEX-NPJ7-0011-R4a-SM-2I3GJ 60-69 years, female 3129.9
GTEX-ZAB4-0011-R4a-SM-4SOKB 40-49 years, male 3042.8
GTEX-1399T-0011-R4b-SM-5DUVX 60-69 years, male 3042.6
GTEX-13O3Q-0011-R4a-SM-5P9H2 50-59 years, male 3037.5
GTEX-T6MN-0011-R4A-SM-32QPG 50-59 years, male 2998.1
GTEX-1GMR8-0011-R4a-SM-9OSX1 50-59 years, female 2962.8
GTEX-N7MT-0011-R4a-SM-2I3G9 60-69 years, female 2941.5
GTEX-1F7RK-0011-R4b-SM-9QEI7 20-29 years, female 2834.0
GTEX-N7MS-0011-R4a-SM-2HMKW 60-69 years, male 2833.0
GTEX-15SHU-0011-R4b-SM-7IGLC 40-49 years, female 2821.5
GTEX-TSE9-0011-R4A-SM-3DB7H 60-69 years, female 2794.4
GTEX-NL3H-0011-R4a-SM-2I3GK 60-69 years, male 2793.9
GTEX-1EMGI-0011-R4b-SM-CJI2D 60-69 years, male 2764.5
GTEX-QDT8-0011-R4A-SM-32PKM 30-39 years, female 2761.8
GTEX-12WSF-0011-R4b-SM-5HL88 70-79 years, male 2746.6
GTEX-15ER7-0011-R4a-SM-6M46S 20-29 years, female 2693.8
GTEX-WHSE-0011-R4A-SM-3P5ZN 20-29 years, male 2679.6
GTEX-X4XX-0011-R4B-SM-46MWL 60-69 years, male 2664.9
GTEX-15EO6-0011-R4a-SM-7KUKZ 50-59 years, male 2636.9
GTEX-X585-0011-R4B-SM-46MVH 50-59 years, male 2633.5
GTEX-T5JC-0011-R4A-SM-32PLT 20-29 years, male 2631.4
GTEX-14JIY-0011-R4b-SM-5ZZV7 60-69 years, male 2625.4
GTEX-14ASI-0011-R4a-SM-69LQ4 60-69 years, male 2624.3
GTEX-1F48J-0011-R4b-SM-9OSVX 50-59 years, female 2605.6
GTEX-X4EP-0011-R4B-SM-3P627 60-69 years, female 2583.7
GTEX-13NYS-0011-R4b-SM-5MR3O 60-69 years, male 2571.6
GTEX-13OW8-0011-R4a-SM-9WG6V 60-69 years, male 2561.7
GTEX-1HB9E-0011-R4b-SM-ARZLS 50-59 years, male 2560.7
GTEX-15CHQ-0011-R4a-SM-686ZX 60-69 years, male 2560.1
GTEX-13112-0011-R4b-SM-5DUXL 50-59 years, male 2552.9
GTEX-1HBPH-0011-R4a-SM-A96RX 40-49 years, female 2510.7
GTEX-WVLH-0011-R4A-SM-3MJFS 50-59 years, male 2507.2
GTEX-145LS-0011-R4b-SM-5S2UT 60-69 years, female 2499.8
GTEX-17EVP-0011-R4a-SM-79OML 40-49 years, male 2491.7
GTEX-13X6J-0011-R4b-SM-5P9K4 50-59 years, male 2487.1
GTEX-1IY9M-0011-R4a-SM-C1YQ2 60-69 years, male 2464.4
GTEX-NPJ8-0011-R4a-SM-2HML3 40-49 years, male 2457.8
GTEX-1B8L1-0011-R4a-SM-7EWFJ 60-69 years, male 2448.9
GTEX-13O3O-0011-R4b-SM-5KM3F 60-69 years, female 2440.7
GTEX-16YQH-0011-R4a-SM-7EPGI 30-39 years, male 2437.7
GTEX-13SLW-0011-R4b-SM-5S2W2 70-79 years, male 2414.1
GTEX-14BIM-0011-R4b-SM-5S2RK 60-69 years, female 2383.8
GTEX-ZVZQ-0011-R4b-SM-57WCZ 60-69 years, female 2377.4
GTEX-1H3NZ-0011-R4a-SM-CL54T 60-69 years, male 2327.0
GTEX-ZAK1-0011-R4a-SM-6AJBK 50-59 years, female 2305.0
GTEX-13N1W-0011-R4a-SM-5MR52 70-79 years, male 2303.2
GTEX-11NUK-0011-R4a-SM-DO12B 50-59 years, male 2286.2
GTEX-1H3O1-0011-R4b-SM-A9SKE 60-69 years, male 2277.0
GTEX-13X6I-0011-R4b-SM-5PNU9 60-69 years, male 2253.0
GTEX-14PQA-0011-R4b-SM-6AJBU 50-59 years, female 2214.7
GTEX-1GN73-0011-R4b-SM-9QEIK 60-69 years, male 2173.2
GTEX-13X6K-0011-R4b-SM-5P9HO 60-69 years, female 2147.1
GTEX-13OVJ-0011-R4b-SM-5P9H5 50-59 years, female 2130.7
GTEX-131XH-0011-R4b-SM-5DUWB 50-59 years, male 2125.4
GTEX-12WSD-0011-R4b-SM-5LZUA 60-69 years, female 2115.3
GTEX-YFC4-0011-R4a-SM-4RGLQ 40-49 years, female 2053.7
GTEX-1313W-0011-R4b-SM-5KLZV 50-59 years, female 2028.1
GTEX-1HCU6-0011-R4b-SM-ARU74 60-69 years, female 1941.8
GTEX-14PN4-0011-R4a-SM-686ZT 50-59 years, male 1915.9
GTEX-XLM4-0011-R4B-SM-4AT5C 60-69 years, male 1892.8
GTEX-13RTJ-0011-R4b-SM-5PNX1 60-69 years, male 1881.8
GTEX-QVJO-0011-R4A-SM-2S1QL 60-69 years, female 1866.0
GTEX-15DYW-0011-R4a-SM-6M46V 60-69 years, female 1835.5
GTEX-13N2G-0011-R4b-SM-5MR54 60-69 years, male 1807.3
GTEX-14ABY-0011-R4b-SM-5S2VN 50-59 years, male 1807.1
GTEX-1A3MX-0011-R4b-SM-7EWFK 60-69 years, male 1801.4
GTEX-1B996-0011-R4b-SM-9OSVO 60-69 years, male 1792.8
GTEX-131YS-0011-R4a-SM-5DUVL 60-69 years, female 1791.5
GTEX-15DCD-0011-R4a-SM-69LPB 70-79 years, female 1751.6
GTEX-13OW5-0011-R4b-SM-5L3HS 60-69 years, male 1735.1
GTEX-1HFI6-0011-R4b-SM-A96RT 40-49 years, male 1721.0
GTEX-S7SE-0011-R4A-SM-2XCDB 50-59 years, male 1621.6
GTEX-13VXU-0011-R4b-SM-5O9CI 50-59 years, male 1611.1
GTEX-P44G-0011-R4A-SM-2I3FB 30-39 years, male 1520.0
GTEX-WZTO-0011-R4A-SM-3NMC7 40-49 years, male 1492.5
GTEX-Q2AG-0011-R4A-SM-2HMKA 40-49 years, female 1388.4
GTEX-1AX9I-0011-R4b-SM-7EPIB 60-69 years, male 1364.6
GTEX-R55E-0011-R4A-SM-2TC5H 20-29 years, male 1358.8
Show allShow less

AMYGDALA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 284.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 284.1
FF:10151-102I7 76 years, female 284.1

Contact

  • NEWS ARTICLES
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.