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RPS27
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  • RPS27
BRAIN PONS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN PONS SPINAL CORD THALAMUS WHITE MATTER
Brain proteome
Pons
PONS - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:3648.3 nTPM
HPA:3648.3 nTPM
FANTOM5:245.1 Scaled Tags Per Million

PONS - Annotated protein expression
Pending normal tissue analysis

PONS - HPA Brain RNA-seq
Max nTPM 3648.3
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 3607.2
2188 Female, age 91, both hemispheres 3668.6
2090 Male, age 80, both hemispheres 3619.2
2301 Female, age 85, both hemispheres 3595.3
1984 Male, age 76, both hemispheres 3545.7
Dorsal cochlear nucleus
nTPM: 3584.7
2802 Male, age 74, right hemisphere 3628.9
2187 Female, age 91, both hemispheres 3624.1
2370 Male, age 61, both hemispheres 3589.7
2378 Male, age 80, both hemispheres 3561.2
2058 Male, age 76, both hemispheres 3519.4
Dorsal tegmental nucleus
nTPM: 3618.7
2358 Male, age 61, both hemispheres 3681.5
2083 Male, age 80, both hemispheres 3633.1
2326 Male, age 74, both hemispheres 3605.7
1936 Male, age 76, left hemisphere 3554.4
Dorsolateral tegmental area
nTPM: 3589.5
2337 Male, age 61, both hemispheres 3627.1
2654 Male, age 80, both hemispheres 3613.0
2141 Male, age 76, both hemispheres 3585.1
2751 Female, age 85, both hemispheres 3581.0
2360 Male, age 74, both hemispheres 3541.5
Kolliker-Fuse nucleus
nTPM: 3616.8
2793 Female, age 91, left hemisphere 3643.3
2315 Male, age 76, right hemisphere 3617.9
2163 Male, age 80, both hemispheres 3589.3
Lateral lemniscal nuclei
nTPM: 3553.1
2169 Male, age 76, both hemispheres 3587.7
2453 Male, age 74, right hemisphere 3578.9
2320 Female, age 91, left hemisphere 3549.4
2746 Female, age 85, left hemisphere 3534.7
2036 Male, age 80, both hemispheres 3514.6
Lateral parabrachial nucleus
nTPM: 3604.7
2792 Male, age 76, both hemispheres 3647.4
2013 Male, age 80, both hemispheres 3599.0
2790 Male, age 61, both hemispheres 3596.0
2139 Female, age 85, right hemisphere 3576.3
Lateral vestibular nucleus
nTPM: 3598.4
2311 Male, age 80, both hemispheres 3629.4
2184 Male, age 76, both hemispheres 3567.4
Locus coeruleus
nTPM: 3571.8
2720 Male, age 74, both hemispheres 3663.5
2162 Male, age 80, both hemispheres 3597.5
2788 Male, age 74, unknown 3585.7
2123 Female, age 91, both hemispheres 3553.0
2317 Female, age 72, unknown 3552.4
1980 Male, age 76, both hemispheres 3535.1
2014 Male, age 55, unknown 3515.3
Medial olivary nucleus
nTPM: 3648.3
2851 Male, age 80, both hemispheres 3748.8
1943 Male, age 61, both hemispheres 3640.0
2138 Female, age 91, both hemispheres 3606.9
1962 Male, age 76, both hemispheres 3597.6
Medial parabrachial nucleus
nTPM: 3608.9
2854 Male, age 80, both hemispheres 3661.2
2170 Female, age 91, both hemispheres 3633.4
2156 Male, age 61, both hemispheres 3611.5
2786 Male, age 76, both hemispheres 3603.3
2463 Female, age 85, right hemisphere 3535.2
Medial periolivary nuclei
nTPM: 3553.7
2458 Female, age 91, both hemispheres 3601.3
2063 Male, age 76, both hemispheres 3553.6
2081 Male, age 80, both hemispheres 3544.5
2171 Female, age 85, both hemispheres 3541.3
2791 Male, age 74, right hemisphere 3527.7
Motor facial nucleus
nTPM: 3574.1
2697 Female, age 85, both hemispheres 3628.1
2795 Female, age 91, both hemispheres 3614.0
2365 Male, age 74, right hemisphere 3599.0
2126 Male, age 61, both hemispheres 3545.5
2327 Male, age 80, both hemispheres 3539.5
2062 Male, age 76, both hemispheres 3518.7
Motor trigeminal nucleus
nTPM: 3569.6
2309 Male, age 76, both hemispheres 3595.0
2335 Male, age 61, both hemispheres 3592.5
2321 Female, age 91, both hemispheres 3562.0
2079 Male, age 80, both hemispheres 3554.9
2560 Male, age 74, both hemispheres 3543.8
Nuclei of the trapezoid body
nTPM: 3541.8
2166 Male, age 80, both hemispheres 3572.2
1983 Male, age 76, both hemispheres 3563.8
2368 Female, age 91, both hemispheres 3537.1
2159 Male, age 61, both hemispheres 3528.8
2735 Female, age 85, both hemispheres 3507.0
Paramedian reticular nucleus
nTPM: 3566.5
2052 Male, age 76, both hemispheres 3613.8
2313 Male, age 61, both hemispheres 3565.3
2050 Female, age 85, both hemispheres 3565.0
2057 Male, age 80, both hemispheres 3521.8
Pontine nuclei
nTPM: 3558.8
2319 Female, age 91, both hemispheres 3606.7
2787 Female, age 85, both hemispheres 3586.9
1863 Male, age 55, unknown 3572.5
2454 Male, age 74, left hemisphere 3562.9
1968 Male, age 76, left hemisphere 3549.0
2115 Male, age 80, left hemisphere 3548.3
2109 Female, age 72, unknown 3537.2
2727 Male, age 61, right hemisphere 3506.5
Pontine raphe nucleus
nTPM: 3558.7
2853 Male, age 76, midline 3574.2
2122 Female, age 85, midline 3543.3
Posteroventral cochlear nucleus
nTPM: 3607.1
2341 Male, age 80, both hemispheres 3710.2
2135 Female, age 91, both hemispheres 3621.8
2371 Male, age 61, both hemispheres 3594.3
2070 Male, age 76, both hemispheres 3555.1
2752 Female, age 85, both hemispheres 3554.0
Principal sensory trigeminal nucleus
nTPM: 3553.0
2367 Female, age 91, left hemisphere 3601.5
2324 Male, age 76, both hemispheres 3566.6
2158 Male, age 61, both hemispheres 3534.8
2008 Male, age 80, left hemisphere 3509.1
Reticular pontine nucleus, caudal
nTPM: 3583.0
2457 Female, age 91, both hemispheres 3607.7
2092 Male, age 76, both hemispheres 3605.5
2559 Male, age 74, both hemispheres 3592.8
2332 Male, age 80, right hemisphere 3525.9
Reticular pontine nucleus, oral
nTPM: 3614.7
2366 Female, age 91, both hemispheres 3705.0
2167 Male, age 76, both hemispheres 3645.9
1939 Male, age 80, both hemispheres 3602.6
2361 Male, age 74, both hemispheres 3595.1
2012 Female, age 85, both hemispheres 3524.7
Reticulotegmental nucleus
nTPM: 3582.4
2452 Male, age 74, both hemispheres 3598.0
2322 Female, age 91, both hemispheres 3585.3
2333 Male, age 80, both hemispheres 3575.0
2325 Male, age 76, both hemispheres 3571.1
Spinal trigeminal nucleus, oral
nTPM: 3578.1
2164 Male, age 80, both hemispheres 3625.6
1978 Male, age 76, both hemispheres 3573.4
2737 Female, age 85, both hemispheres 3535.1
Subcoeruleus area
nTPM: 3584.5
2451 Male, age 74, both hemispheres 3609.3
1958 Male, age 80, both hemispheres 3606.6
2369 Female, age 85, left hemisphere 3586.6
2323 Female, age 91, left hemisphere 3583.2
2089 Male, age 76, left hemisphere 3537.1
Superior olive
nTPM: 3552.2
2561 Female, age 91, both hemispheres 3573.6
2020 Male, age 76, both hemispheres 3571.8
2364 Male, age 74, right hemisphere 3542.9
2329 Male, age 80, right hemisphere 3537.6
1875 Female, age 85, both hemispheres 3534.9
Superior vestibular nucleus
nTPM: 3592.8
2383 Male, age 74, both hemispheres 3633.8
2015 Male, age 80, both hemispheres 3601.4
2061 Male, age 76, both hemispheres 3543.2
Ventral periolivary nuclei
nTPM: 3566.1
2165 Male, age 80, both hemispheres 3592.2
2794 Female, age 91, left hemisphere 3582.0
2023 Male, age 76, both hemispheres 3561.8
2130 Female, age 85, both hemispheres 3528.3
Ventrolateral tegmental area, A5 NE cell group
nTPM: 3595.7
2840 Female, age 85, both hemispheres 3623.5
2359 Male, age 61, both hemispheres 3617.7
2161 Male, age 80, both hemispheres 3601.9
1959 Male, age 76, both hemispheres 3601.6
2449 Male, age 74, both hemispheres 3570.4
2456 Female, age 91, both hemispheres 3559.0

PONS - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

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Max Scaled Tags Per Million 245.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 245.1
FF:10165-103B3 76 years, female 265.2
FF:10182-103D2 60 years, female 224.9
Pons
Scaled Tags Per Million: 95.4
FF:10033-101E6 18-54 years, mixed 95.4

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