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RPS27
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TISSUE RETINA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN OVARY
PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
Dictionary
Tissue proteome
Eye
Retina
RETINA - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:1411.8 nTPM
GTEx:1411.8 nTPM
FANTOM5:256.4 Scaled Tags Per Million

RETINA - Annotated protein expression
Pending normal tissue analysis

RETINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 1411.8
GTEx sample id Sample description nTPM
Retina
Average nTPM: 1411.8
Samples: 105

Max nTPM: 2039.5
Min nTPM: 963.0
Std nTPM: 226.0
Median nTPM:
153_1 70 years, female 2039.5
246_1 77 years, male 1982.3
495_1 57 years, female 1885.9
17_1 71 years, male 1808.5
189_1 76 years, male 1786.2
384_1 83 years, male 1784.1
321_1 62 years, female 1750.3
377_1 82 years, female 1748.1
139_1 64 years, female 1747.5
322_1 76 years, male 1744.5
389_1 86 years, female 1743.0
120_1 70 years, female 1737.3
379_1 60 years, male 1710.6
452_1 88 years, female 1695.9
308_1 70 years, female 1685.3
307_1 66 years, female 1676.1
126_1 63 years, male 1672.9
414_1 84 years, female 1662.0
35_1 74 years, female 1654.8
404_1 82 years, female 1636.8
41_1 94 years, female 1633.3
265_1 87 years, male 1627.6
394_1 75 years, female 1606.2
4_1 88 years, female 1589.1
376_1 75 years, female 1586.4
311_1 78 years, male 1570.5
526_1 61 years, male 1569.7
145_1 84 years, male 1543.0
2_1 77 years, female 1542.4
320_1 89 years, female 1535.0
177_1 74 years, male 1531.8
229_1 69 years, female 1522.2
237_1 82 years, male 1519.7
254_1 77 years, female 1518.1
396_1 62 years, male 1513.2
405_1 91 years, male 1510.2
315_1 62 years, female 1508.6
137_1 83 years, male 1492.8
386_1 76 years, male 1473.8
18_1 88 years, male 1465.3
316_1 62 years, male 1450.3
501_1 88 years, male 1446.7
518_1 75 years, female 1442.1
89_1 63 years, male 1441.4
217_1 76 years, male 1438.2
447_1 81 years, male 1424.3
466_1 57 years, female 1415.2
413_1 59 years, female 1412.7
266_1 85 years, male 1409.8
251_1 78 years, male 1397.5
6_1 73 years, female 1392.9
319_1 81 years, male 1392.9
415_1 77 years, female 1371.2
142_1 61 years, female 1364.8
499_1 55 years, female 1361.1
162_1 79 years, female 1357.9
491_1 89 years, female 1357.1
406_1 79 years, male 1351.7
163_1 78 years, male 1351.2
173_1 67 years, male 1348.0
355_1 70 years, female 1346.5
119_1 70 years, female 1343.6
347_1 72 years, male 1342.0
324_1 76 years, male 1332.9
264_1 73 years, female 1327.4
288_1 66 years, female 1324.7
81_1 67 years, male 1322.1
348_1 84 years, male 1320.5
468_1 89 years, male 1308.8
375_1 74 years, female 1300.2
109_1 81 years, female 1288.1
117_1 61 years, male 1280.6
314_1 67 years, male 1278.2
243_1 75 years, male 1267.2
42_1 85 years, male 1265.3
295_1 61 years, female 1260.4
172_1 72 years, female 1260.2
115_1 83 years, male 1243.4
313_1 79 years, female 1240.4
503_1 68 years, male 1235.9
218_1 71 years, female 1235.4
317_1 60 years, male 1231.4
351_1 91 years, male 1221.5
425_1 59 years, female 1218.9
335_1 73 years, female 1215.4
291_1 76 years, male 1215.2
318_1 68 years, male 1212.2
149_1 88 years, male 1211.6
517_1 88 years, male 1168.2
32_1 67 years, male 1163.2
353_1 82 years, female 1160.2
480_1 63 years, male 1159.6
349_1 83 years, male 1155.5
292_1 71 years, male 1132.8
99_1 64 years, male 1130.5
352_1 62 years, male 1127.8
354_1 81 years, female 1115.5
293_1 68 years, female 1111.1
286_1 68 years, female 1109.3
490_1 67 years, female 1077.8
350_1 84 years, female 1048.5
506_1 65 years, male 1041.7
9_1 66 years, female 1025.6
356_1 87 years, female 965.3
43_1 64 years, female 963.0
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RETINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 256.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Retina
Scaled Tags Per Million: 256.4
FF:10030-101E3 24-65 years, mixed 256.4

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by the Knut & Alice Wallenberg Foundation.