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RPS27
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TISSUE SPINAL CORD Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN OVARY
PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
Dictionary
Tissue proteome
SPINAL CORD - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:3605.2 nTPM
HPA:3605.2 nTPM
GTEx:3150.0 nTPM
FANTOM5:275.1 Scaled Tags Per Million

SPINAL CORD - Annotated protein expression
Pending normal tissue analysis

SPINAL CORD - HPA Brain RNA-seq
Max nTPM 3605.2
Sample id Sample description nTPM
Cervical spinal cord, central gray
nTPM: 3583.3
2565 Male, age 75, midline 3661.7
1981 Female, age 72, midline 3598.8
2048 Male, age 55, midline 3591.1
2816 Male, age 47, midline 3554.8
2194 Female, age 79, both hemispheres 3509.9
Cervical spinal cord, dorsal horn
nTPM: 3588.0
2069 Male, age 47, both hemispheres 3627.2
2173 Female, age 72, unknown 3623.4
1877 Male, age 55, unknown 3600.9
2296 Male, age 66, both hemispheres 3571.1
2721 Male, age 90, both hemispheres 3562.2
2297 Male, age 75, both hemispheres 3543.5
Cervical spinal cord, ventral horn
nTPM: 3605.2
2098 Female, age 72, unknown 3667.7
2480 Male, age 75, both hemispheres 3634.7
2809 Male, age 90, both hemispheres 3630.8
2068 Male, age 55, unknown 3617.8
2295 Male, age 66, both hemispheres 3566.0
2820 Female, age 79, both hemispheres 3514.3

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 3150.0
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 3150.0
Samples: 159

Max nTPM: 6443.1
Min nTPM: 1244.5
Std nTPM: 1157.5
Median nTPM: 2891.8
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 6443.1
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 6153.5
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 6036.7
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 5994.0
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 5993.6
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 5985.5
GTEX-QVUS-0011-R9A-SM-3GIJA 60-69 years, female 5607.4
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 5577.0
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 5501.7
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 5340.6
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 5063.8
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 4956.2
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 4858.6
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 4804.8
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 4804.5
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 4800.2
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 4796.0
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 4776.5
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 4759.7
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 4701.0
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 4678.1
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 4523.0
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 4424.4
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 4407.5
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 4399.5
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 4374.9
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 4360.7
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 4331.3
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 4264.8
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 4259.4
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 4232.9
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 4223.2
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 4175.6
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 4124.1
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 4033.8
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 3932.1
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 3920.8
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 3833.7
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 3823.4
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 3805.7
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 3800.2
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 3773.8
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 3763.3
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 3762.8
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 3700.5
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 3673.6
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 3661.8
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 3633.6
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 3615.3
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 3601.6
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 3596.5
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 3580.1
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 3571.2
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 3496.8
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 3494.5
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 3471.7
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 3442.9
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 3422.5
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 3418.1
GTEX-RU72-0011-R9A-SM-2TF67 50-59 years, female 3413.0
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 3411.4
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 3355.0
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 3312.6
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 3281.0
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 3234.8
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 3169.0
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 3165.1
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 3161.4
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 3158.0
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 3144.7
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 3040.2
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 3039.5
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 3008.5
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 2994.5
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 2990.4
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 2957.2
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 2942.1
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 2930.0
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 2910.8
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 2891.8
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 2879.7
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 2872.4
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 2868.3
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 2828.7
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 2824.7
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 2787.3
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 2769.3
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 2753.9
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 2716.4
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 2705.4
GTEX-NPJ8-0011-R9a-SM-2YUN5 40-49 years, male 2695.5
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 2655.1
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 2623.6
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 2610.0
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 2586.8
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 2582.9
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 2573.7
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 2572.4
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 2569.4
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 2566.8
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 2564.6
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 2562.9
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 2561.5
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 2552.6
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 2535.4
GTEX-1J1OQ-0011-R9b-SM-ARZMK 40-49 years, female 2515.3
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 2500.6
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 2485.7
GTEX-Q2AG-0011-R9A-SM-2HMJ6 40-49 years, female 2470.3
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 2453.3
GTEX-NPJ7-0011-R9a-SM-2TC5R 60-69 years, female 2444.6
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 2439.8
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 2412.1
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 2410.2
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 2398.4
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 2393.9
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 2352.9
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 2326.7
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 2289.4
GTEX-18464-0011-R9a-SM-731BK 50-59 years, male 2279.0
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 2250.2
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 2226.1
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 2218.7
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 2209.3
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 2189.6
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 2172.3
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 2161.3
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 2145.2
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 2104.0
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 2095.7
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 2089.1
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 2073.9
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 2052.6
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 2049.0
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 2040.9
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 2016.8
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 2011.1
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 1991.7
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 1944.7
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 1924.0
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 1907.4
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 1864.2
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 1823.7
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 1812.3
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 1770.2
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 1765.2
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 1764.7
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 1706.5
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 1685.3
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 1667.3
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 1644.8
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 1608.7
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 1603.2
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 1507.7
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 1503.4
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 1402.5
GTEX-RNOR-0011-R9A-SM-2TF52 50-59 years, female 1275.7
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 1253.0
GTEX-R55E-0011-R9A-SM-2TC6C 20-29 years, male 1244.5
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SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 275.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 275.1
FF:10181-103D1 60 years, female 363.9
FF:10159-103A6 76 years, female 186.4

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