HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:62.1 nTPM
HPA:62.1 nTPM
GTEx:76.7 nTPM
FANTOM5:16.0 Scaled Tags Per Million
Mouse:47.9 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA014667
Glial cells Medium
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 62.1
Sample id Sample description nTPM
Hippocampus
nTPM: 60.1
1898 Male, age 80, left hemisphere 63.3
2621 Female, age 67, right hemisphere 60.4
2529 Female, age 94, left hemisphere 60.3
1855 Male, age 76, left hemisphere 59.3
2148 Female, age 91, left hemisphere 59.0
1911 Female, age 85, right hemisphere 58.6
Dentate gyrus
nTPM: 61.3
2530 Female, age 94, left hemisphere 66.4
2528 Male, age 74, both hemispheres 61.6
2010 Male, age 76, both hemispheres 61.0
2246 Female, age 85, both hemispheres 60.6
1927 Female, age 91, both hemispheres 60.2
2531 Female, age 67, both hemispheres 58.1
Entorhinal gyrus
nTPM: 58.9
2117 Female, age 91, right hemisphere 61.4
1787 Male, age 76, left hemisphere 61.0
1938 Female, age 85, left hemisphere 60.3
2764 Male, age 80, right hemisphere 60.0
2686 Male, age 75, right hemisphere 56.0
2613 Female, age 94, left hemisphere 54.9
Hippocampus, CA1
nTPM: 62.1
2045 Male, age 76, both hemispheres 66.0
2749 Male, age 80, left hemisphere 65.6
1873 Female, age 85, both hemispheres 59.8
2082 Female, age 91, right hemisphere 59.6
2527 Male, age 74, both hemispheres 59.5
Hippocampus, CA2
nTPM: 59.8
2249 Male, age 74, both hemispheres 65.8
1963 Male, age 80, left hemisphere 60.1
1940 Female, age 85, left hemisphere 60.0
1892 Male, age 76, both hemispheres 58.9
2437 Female, age 94, left hemisphere 57.6
2113 Female, age 91, right hemisphere 56.3
Hippocampus, CA3
nTPM: 60.4
2436 Male, age 74, both hemispheres 66.1
2620 Female, age 94, left hemisphere 62.6
1867 Male, age 76, both hemispheres 59.9
1891 Female, age 85, both hemispheres 59.1
2137 Male, age 80, left hemisphere 58.8
2861 Female, age 67, both hemispheres 56.1
Parahippocampal cortex
nTPM: 57.2
1933 Female, age 85, both hemispheres 60.4
2250 Female, age 67, right hemisphere 59.7
2018 Male, age 76, both hemispheres 58.3
1990 Female, age 91, right hemisphere 57.4
2532 Female, age 72, left hemisphere 57.2
2692 Male, age 74, both hemispheres 56.7
1850 Male, age 80, both hemispheres 56.4
2622 Female, age 67, right hemisphere 55.9
2693 Female, age 94, both hemispheres 55.6
2245 Female, age 91, both hemispheres 54.8
Perirhinal gyrus
nTPM: 59.3
1794 Male, age 80, right hemisphere 62.8
1841 Female, age 85, right hemisphere 60.9
1847 Female, age 91, left hemisphere 60.8
2848 Male, age 76, right hemisphere 58.4
2521 Female, age 94, right hemisphere 53.8
Subiculum
nTPM: 58.5
1977 Female, age 85, both hemispheres 61.2
2619 Male, age 74, both hemispheres 60.9
2042 Male, age 76, both hemispheres 58.4
2729 Female, age 91, right hemisphere 57.8
1901 Male, age 80, both hemispheres 56.5
2438 Female, age 94, left hemisphere 56.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 76.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 76.7
Samples: 197

Max nTPM: 156.5
Min nTPM: 33.5
Std nTPM: 20.4
Median nTPM: 75.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 156.5
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 151.7
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 145.6
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 139.2
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 137.3
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 125.1
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 120.5
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 111.1
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 109.5
GTEX-17HHY-0011-R1a-SM-7189V 50-59 years, male 108.1
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 106.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 16.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 16.0
FF:10169-103B7 60 years, female 16.7
FF:10153-102I9 76 years, female 15.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 47.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 41.1
Samples: 4

Max nTPM: 46.1
Min nTPM: 37.6
Sample A Male 46.1
Sample B Male 42.3
Sample C Female 37.6
Sample D Female 38.4
Hippocampal formation
nTPM: 48.0
Samples: 4

Max nTPM: 66.9
Min nTPM: 38.0
Sample A Male 43.1
Sample B Male 43.8
Sample C Female 38.0
Sample D Female 66.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
68546107 Antisense, RP_050120_02_A03, Mouse strain C57BL/6J (56 days, male) 0.1

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.