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TISSUE PRIMARY DATA SPINAL CORD Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
SPINAL CORD - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:237.7 nTPM
HPA:237.7 nTPM
GTEx:205.8 nTPM
FANTOM5:445.4 Scaled Tags Per Million
Pig:230.4 nTPM

SPINAL CORD - HPA Brain RNA-seq
Max nTPM 237.7
Sample id Sample description nTPM
Cervical spinal cord, central gray
nTPM: 224.5
1981 Female, age 72, midline 264.5
2048 Male, age 55, midline 218.4
2816 Male, age 47, midline 215.7
2565 Male, age 75, midline 212.8
2194 Female, age 79, both hemispheres 210.9
Cervical spinal cord, dorsal horn
nTPM: 237.7
2296 Male, age 66, both hemispheres 270.6
2173 Female, age 72, unknown 262.6
2069 Male, age 47, both hemispheres 253.8
2721 Male, age 90, both hemispheres 217.1
1877 Male, age 55, unknown 214.1
2297 Male, age 75, both hemispheres 207.9
Cervical spinal cord, ventral horn
nTPM: 230.0
2098 Female, age 72, unknown 271.5
2809 Male, age 90, both hemispheres 263.3
2480 Male, age 75, both hemispheres 228.9
2068 Male, age 55, unknown 217.4
2295 Male, age 66, both hemispheres 207.5
2820 Female, age 79, both hemispheres 191.7

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 205.8
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 205.8
Samples: 159

Max nTPM: 552.0
Min nTPM: 90.7
Std nTPM: 64.1
Median nTPM: 195.1
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 552.0
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 422.0
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 413.7
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 404.1
GTEX-NPJ8-0011-R9a-SM-2YUN5 40-49 years, male 359.9
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 339.2
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 330.5
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 323.9
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 323.1
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 321.8
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 313.4
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 299.8
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 294.9
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 293.7
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 288.8
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 288.6
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 286.4
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 284.3
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 283.6
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 276.5
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 275.1
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 266.3
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 261.1
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 259.4
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 253.5
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 253.3
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 252.1
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 250.4
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 248.0
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 247.6
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 247.3
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 246.7
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 243.0
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 241.9
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 240.0
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 234.1
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 226.1
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 225.1
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 224.2
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 224.0
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 222.5
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 222.2
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 221.5
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 219.7
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 218.9
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 217.4
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 217.0
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 216.0
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 215.8
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 214.2
GTEX-NPJ7-0011-R9a-SM-2TC5R 60-69 years, female 213.7
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 212.7
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 212.2
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 212.1
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 211.4
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 209.7
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 209.6
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 209.3
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 208.3
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 207.9
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 207.5
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 207.2
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 206.2
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 206.2
GTEX-Q2AG-0011-R9A-SM-2HMJ6 40-49 years, female 205.9
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 203.7
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 203.0
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 202.4
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 202.3
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 201.5
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 200.8
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 200.1
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 197.6
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 197.3
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 197.3
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 196.5
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 196.2
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 196.2
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 195.7
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 195.1
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 194.6
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 194.6
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 192.1
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 191.2
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 190.5
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 190.2
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 188.3
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 187.4
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 186.7
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 186.5
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 185.8
GTEX-RU72-0011-R9A-SM-2TF67 50-59 years, female 184.9
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 184.5
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 183.5
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 183.3
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 182.9
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 181.1
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 181.0
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 180.3
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 180.2
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 179.5
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 179.1
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 179.0
GTEX-R55E-0011-R9A-SM-2TC6C 20-29 years, male 178.2
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 177.8
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 177.5
GTEX-RNOR-0011-R9A-SM-2TF52 50-59 years, female 177.5
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 177.3
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 177.1
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 176.9
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 176.9
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 175.6
GTEX-18464-0011-R9a-SM-731BK 50-59 years, male 174.4
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 173.1
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 172.5
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 169.7
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 169.6
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 169.5
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 168.8
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 167.5
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 167.5
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 166.1
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 162.8
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 162.0
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 161.0
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 160.6
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 160.3
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 160.1
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 157.6
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 157.0
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 156.4
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 155.8
GTEX-QVUS-0011-R9A-SM-3GIJA 60-69 years, female 154.7
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 153.4
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 153.2
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 149.3
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 148.8
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 148.5
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 148.1
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 147.7
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 147.3
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 146.5
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 143.7
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 140.9
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 137.7
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 136.3
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 136.2
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 135.2
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 134.7
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 133.4
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 131.7
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 130.3
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 129.8
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 122.7
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 119.4
GTEX-1J1OQ-0011-R9b-SM-ARZMK 40-49 years, female 118.5
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 109.5
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 96.2
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 90.7
Show allShow less

SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 445.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 445.4
FF:10181-103D1 60 years, female 509.2
FF:10159-103A6 76 years, female 381.5

SPINAL CORD - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 230.4
Pig sample Sample description nTPM
Dorsal spinal cord
nTPM: 230.4
Samples: 4

Max nTPM: 266.8
Min nTPM: 206.1
Sample A Female 215.8
Sample B Female 206.1
Sample C Male 266.8
Sample D Male 232.9
Ventral spinal cord
nTPM: 225.2
Samples: 4

Max nTPM: 233.6
Min nTPM: 204.6
Sample A Female 229.4
Sample B Female 204.6
Sample C Male 233.6
Sample D Male 233.3

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