HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:7.8 nTPM
HPA:7.8 nTPM
GTEx:99.6 nTPM
FANTOM5:65.5 Scaled Tags Per Million
Pig:74.2 nTPM
Mouse:127.8 nTPM
Allen mouse:13.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA052096Antibody HPA059714
Glial cells Not detectedLow
Neuronal cells MediumMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 7.8
Sample id Sample description nTPM
Hippocampus
nTPM: 5.8
2529 Female, age 94, left hemisphere 9.4
2621 Female, age 67, right hemisphere 7.0
2148 Female, age 91, left hemisphere 6.5
1911 Female, age 85, right hemisphere 5.0
1898 Male, age 80, left hemisphere 3.9
1855 Male, age 76, left hemisphere 3.1
Dentate gyrus
nTPM: 7.5
2246 Female, age 85, both hemispheres 14.2
2530 Female, age 94, left hemisphere 11.2
2528 Male, age 74, both hemispheres 8.3
2531 Female, age 67, both hemispheres 6.0
2010 Male, age 76, both hemispheres 4.6
1927 Female, age 91, both hemispheres 0.4
Entorhinal gyrus
nTPM: 4.7
2117 Female, age 91, right hemisphere 8.1
2764 Male, age 80, right hemisphere 7.3
2686 Male, age 75, right hemisphere 4.3
1938 Female, age 85, left hemisphere 4.2
2613 Female, age 94, left hemisphere 2.8
1787 Male, age 76, left hemisphere 1.3
Hippocampus, CA1
nTPM: 7.8
2527 Male, age 74, both hemispheres 16.5
2749 Male, age 80, left hemisphere 11.3
1873 Female, age 85, both hemispheres 5.2
2045 Male, age 76, both hemispheres 4.0
2082 Female, age 91, right hemisphere 2.0
Hippocampus, CA2
nTPM: 3.8
2437 Female, age 94, left hemisphere 8.2
2249 Male, age 74, both hemispheres 4.8
1892 Male, age 76, both hemispheres 4.0
2113 Female, age 91, right hemisphere 2.3
1963 Male, age 80, left hemisphere 2.0
1940 Female, age 85, left hemisphere 1.6
Hippocampus, CA3
nTPM: 5.0
2861 Female, age 67, both hemispheres 9.6
2436 Male, age 74, both hemispheres 7.6
1867 Male, age 76, both hemispheres 4.9
2620 Female, age 94, left hemisphere 3.5
2137 Male, age 80, left hemisphere 2.2
1891 Female, age 85, both hemispheres 2.1
Parahippocampal cortex
nTPM: 5.4
2245 Female, age 91, both hemispheres 13.4
2532 Female, age 72, left hemisphere 6.9
2250 Female, age 67, right hemisphere 6.5
1933 Female, age 85, both hemispheres 5.3
2622 Female, age 67, right hemisphere 4.6
2693 Female, age 94, both hemispheres 4.4
2018 Male, age 76, both hemispheres 4.0
2692 Male, age 74, both hemispheres 3.3
1990 Female, age 91, right hemisphere 2.7
1850 Male, age 80, both hemispheres 2.6
Perirhinal gyrus
nTPM: 1.4
2848 Male, age 76, right hemisphere 2.4
1794 Male, age 80, right hemisphere 2.0
2521 Female, age 94, right hemisphere 1.9
1841 Female, age 85, right hemisphere 0.9
1847 Female, age 91, left hemisphere 0.0
Subiculum
nTPM: 5.9
2438 Female, age 94, left hemisphere 8.9
2729 Female, age 91, right hemisphere 8.5
2042 Male, age 76, both hemispheres 5.7
1977 Female, age 85, both hemispheres 4.3
2619 Male, age 74, both hemispheres 4.3
1901 Male, age 80, both hemispheres 4.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 99.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 99.6
Samples: 197

Max nTPM: 152.6
Min nTPM: 53.2
Std nTPM: 15.6
Median nTPM: 99.6
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 152.6
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 150.5
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 140.0
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 136.0
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 132.8
GTEX-15ER7-0011-R1b-SM-7KUE1 20-29 years, female 132.1
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 131.0
GTEX-17HHY-0011-R1a-SM-7189V 50-59 years, male 130.6
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 126.3
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 126.3
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 124.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 65.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 65.5
FF:10153-102I9 76 years, female 66.1
FF:10169-103B7 60 years, female 64.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 74.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 74.2
Samples: 4

Max nTPM: 102.7
Min nTPM: 50.6
Sample A Female 102.7
Sample B Female 69.8
Sample C Male 73.7
Sample D Male 50.6
Entorhinal cortex
nTPM: 55.4
Samples: 4

Max nTPM: 62.0
Min nTPM: 44.9
Sample A Female 62.0
Sample B Female 59.4
Sample C Male 55.3
Sample D Male 44.9
Subiculum
nTPM: 58.1
Samples: 4

Max nTPM: 77.7
Min nTPM: 49.5
Sample A Female 77.7
Sample B Female 52.4
Sample C Male 52.9
Sample D Male 49.5
Ventral hippocampus
nTPM: 67.9
Samples: 4

Max nTPM: 79.4
Min nTPM: 48.0
Sample A Female 70.8
Sample B Female 48.0
Sample C Male 79.4
Sample D Male 73.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 127.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 120.0
Samples: 4

Max nTPM: 126.2
Min nTPM: 114.2
Sample A Male 117.5
Sample B Male 126.2
Sample C Female 122.2
Sample D Female 114.2
Hippocampal formation
nTPM: 127.8
Samples: 4

Max nTPM: 133.6
Min nTPM: 121.6
Sample A Male 132.7
Sample B Male 121.6
Sample C Female 123.3
Sample D Female 133.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 13.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 13.3
69202675 Antisense, RP_050324_04_B07, Mouse strain C57BL/6J (56 days, male) 13.3

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