HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: Not detected
Mouse brain, Intensity
Hippocampal formationi 		78.006
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:40.9 nTPM
HPA:40.9 nTPM
GTEx:59.8 nTPM
FANTOM5:22.7 Scaled Tags Per Million
Pig:23.9 nTPM
Mouse:38.2 nTPM
Allen mouse:13.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA037991
Glial cells High
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - Mouse brain profilei , antibody HPA037991
Hippocampal formation mean intensity 78.006
intensityi
FRONT BACK
Polymorph layer of the dentate gyrus 49.034
Molecular layer of the dentate gyrus 65.753
Granular dentate gyrus 72.895
CA1 - oriens layer 35.119
CA1 - pyramidal layer 68.201
CA1 - radiatum layer 60.587
CA2 - oriens layer 36.764
CA2 - pyramidal layer 78.006
CA2 - radiatum layer 53.770
CA3 - oriens layer 40.212
CA3 - pyramidal layer 56.232
CA3 - radiatum layer 48.351
Stratum lucidum 47.143
Lacunosum moleculare 65.766
Subiculum 55.222

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 40.9
Sample id Sample description nTPM
Hippocampus
nTPM: 35.7
1911 Female, age 85, right hemisphere 39.6
2621 Female, age 67, right hemisphere 36.3
1898 Male, age 80, left hemisphere 36.0
2529 Female, age 94, left hemisphere 35.3
2148 Female, age 91, left hemisphere 34.2
1855 Male, age 76, left hemisphere 32.8
Dentate gyrus
nTPM: 37.5
2530 Female, age 94, left hemisphere 48.2
2528 Male, age 74, both hemispheres 37.9
2010 Male, age 76, both hemispheres 36.5
2531 Female, age 67, both hemispheres 34.8
2246 Female, age 85, both hemispheres 34.6
1927 Female, age 91, both hemispheres 33.1
Entorhinal gyrus
nTPM: 38.2
2117 Female, age 91, right hemisphere 52.1
2764 Male, age 80, right hemisphere 43.5
2613 Female, age 94, left hemisphere 34.1
1938 Female, age 85, left hemisphere 34.0
1787 Male, age 76, left hemisphere 33.2
2686 Male, age 75, right hemisphere 32.1
Hippocampus, CA1
nTPM: 32.9
2527 Male, age 74, both hemispheres 35.4
1873 Female, age 85, both hemispheres 35.3
2749 Male, age 80, left hemisphere 34.0
2082 Female, age 91, right hemisphere 30.9
2045 Male, age 76, both hemispheres 28.9
Hippocampus, CA2
nTPM: 37.8
1963 Male, age 80, left hemisphere 44.3
2249 Male, age 74, both hemispheres 40.3
1940 Female, age 85, left hemisphere 39.2
2437 Female, age 94, left hemisphere 37.0
2113 Female, age 91, right hemisphere 33.3
1892 Male, age 76, both hemispheres 32.5
Hippocampus, CA3
nTPM: 33.3
1891 Female, age 85, both hemispheres 42.6
2620 Female, age 94, left hemisphere 37.7
1867 Male, age 76, both hemispheres 31.7
2436 Male, age 74, both hemispheres 31.1
2137 Male, age 80, left hemisphere 28.9
2861 Female, age 67, both hemispheres 27.7
Parahippocampal cortex
nTPM: 33.2
2532 Female, age 72, left hemisphere 38.2
1990 Female, age 91, right hemisphere 37.2
2692 Male, age 74, both hemispheres 37.2
2018 Male, age 76, both hemispheres 35.1
1850 Male, age 80, both hemispheres 33.9
1933 Female, age 85, both hemispheres 33.5
2245 Female, age 91, both hemispheres 31.6
2693 Female, age 94, both hemispheres 30.5
2250 Female, age 67, right hemisphere 28.8
2622 Female, age 67, right hemisphere 26.3
Perirhinal gyrus
nTPM: 32.4
2521 Female, age 94, right hemisphere 35.0
1794 Male, age 80, right hemisphere 34.1
2848 Male, age 76, right hemisphere 32.3
1841 Female, age 85, right hemisphere 32.2
1847 Female, age 91, left hemisphere 28.4
Subiculum
nTPM: 40.9
2042 Male, age 76, both hemispheres 46.0
1901 Male, age 80, both hemispheres 44.6
1977 Female, age 85, both hemispheres 44.0
2438 Female, age 94, left hemisphere 38.2
2619 Male, age 74, both hemispheres 36.2
2729 Female, age 91, right hemisphere 36.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 59.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 59.8
Samples: 197

Max nTPM: 251.5
Min nTPM: 4.3
Std nTPM: 34.3
Median nTPM: 52.1
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 251.5
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 200.5
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 183.1
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 167.6
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 152.5
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 146.0
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 128.2
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 127.5
GTEX-1GN2E-0011-R1b-SM-CE6RJ 60-69 years, male 124.6
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 121.4
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 118.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 22.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 22.7
FF:10153-102I9 76 years, female 28.7
FF:10169-103B7 60 years, female 16.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 23.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 23.9
Samples: 4

Max nTPM: 38.0
Min nTPM: 11.6
Sample A Female 38.0
Sample B Female 19.2
Sample C Male 26.7
Sample D Male 11.6
Entorhinal cortex
nTPM: 10.6
Samples: 4

Max nTPM: 13.9
Min nTPM: 8.2
Sample A Female 9.6
Sample B Female 13.9
Sample C Male 8.2
Sample D Male 10.8
Subiculum
nTPM: 12.8
Samples: 4

Max nTPM: 15.9
Min nTPM: 10.9
Sample A Female 15.9
Sample B Female 13.2
Sample C Male 11.3
Sample D Male 10.9
Ventral hippocampus
nTPM: 18.2
Samples: 4

Max nTPM: 23.0
Min nTPM: 12.2
Sample A Female 23.0
Sample B Female 12.2
Sample C Male 16.2
Sample D Male 21.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 38.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 28.9
Samples: 4

Max nTPM: 34.8
Min nTPM: 20.9
Sample A Male 34.8
Sample B Male 32.6
Sample C Female 27.4
Sample D Female 20.9
Hippocampal formation
nTPM: 38.2
Samples: 4

Max nTPM: 45.2
Min nTPM: 34.4
Sample A Male 34.4
Sample B Male 38.1
Sample C Female 45.2
Sample D Female 35.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 13.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 13.9
70565891 Antisense, RP_050628_01_F02, Mouse strain C57BL/6J (56 days, male) 13.9

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The Human Protein Atlas

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