AMYGDALA - Expression summary
Mouse brain, Intensity
Amygdalai 		53.104
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:40.9 nTPM
HPA:40.9 nTPM
GTEx:36.1 nTPM
FANTOM5:18.8 Scaled Tags Per Million
Pig:17.3 nTPM
Mouse:26.0 nTPM
Allen mouse:13.4 Expression energy

AMYGDALA - Mouse brain profilei , antibody HPA037991
Amygdala mean intensity 53.104
intensityi
FRONT BACK
Nucleus of the lateral olfactory tract 31.548
Basal medial amygdaloid nucleus 34.129
Basal lateral amygdala* -
Basal lateral amygdaloid nucleus 40.392
Cortical amygdala 27.009
Central amygdala 53.104
Medial amygdaloid nucleus 41.742

AMYGDALA - HPA Brain RNA-seq
Max nTPM 40.9
Sample id Sample description nTPM
Amygdala
nTPM: 38.0
2814 Male, age 76, right hemisphere 43.4
2514 Male, age 75, right hemisphere 39.3
2695 Female, age 67, right hemisphere 37.5
2517 Female, age 94, left hemisphere 35.6
1987 Female, age 91, left hemisphere 34.2
Basal amygdala
nTPM: 35.6
2827 Female, age 67, right hemisphere 38.8
2110 Male, age 80, left hemisphere 37.2
1955 Male, age 76, both hemispheres 36.6
2685 Female, age 94, left hemisphere 36.3
2609 Male, age 75, right hemisphere 35.4
2243 Female, age 91, right hemisphere 29.0
Central amygdala
nTPM: 36.5
1905 Male, age 76, both hemispheres 41.3
2239 Male, age 80, left hemisphere 37.0
2701 Female, age 91, right hemisphere 35.0
2515 Male, age 75, right hemisphere 34.7
2826 Female, age 94, left hemisphere 34.6
Corticomedial amygdala
nTPM: 32.6
2428 Male, age 75, right hemisphere 34.8
2429 Female, age 94, left hemisphere 34.7
2535 Female, age 67, right hemisphere 34.2
2240 Male, age 76, both hemispheres 32.7
2829 Male, age 80, left hemisphere 31.5
2242 Female, age 91, right hemisphere 27.6
Lateral amygdala
nTPM: 40.9
2830 Female, age 67, right hemisphere 42.9
2516 Male, age 75, right hemisphere 42.6
1883 Male, age 76, both hemispheres 42.4
2256 Male, age 80, left hemisphere 41.3
2534 Female, age 94, left hemisphere 39.9
2255 Female, age 91, right hemisphere 36.3
Stria terminalis, bed nucleus
nTPM: 32.8
2486 Female, age 94, both hemispheres 34.2
1974 Female, age 91, both hemispheres 33.0
2201 Male, age 74, unknown 31.1

AMYGDALA - GTEx RNA-seqi
Average nTPM 36.1
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 36.1
Samples: 152

Max nTPM: 102.6
Min nTPM: 2.4
Std nTPM: 17.2
Median nTPM: 32.5
GTEX-14E7W-0011-R4b-SM-62LEA 70-79 years, male 102.6
GTEX-N7MS-0011-R4a-SM-2HMKW 60-69 years, male 91.8
GTEX-1N2DW-0011-R4b-SM-EZ6MD 50-59 years, male 91.8
GTEX-X585-0011-R4B-SM-46MVH 50-59 years, male 86.8
GTEX-14PJM-0011-R4a-SM-5YYAS 50-59 years, female 82.5
GTEX-18464-0011-R4a-SM-7LG6T 50-59 years, male 76.9
GTEX-131XH-0011-R4b-SM-5DUWB 50-59 years, male 70.0
GTEX-X4XX-0011-R4B-SM-46MWL 60-69 years, male 66.7
GTEX-1C6VR-0011-R4b-SM-9QEGZ 60-69 years, male 66.2
GTEX-144GL-0011-R4a-SM-5PNUI 50-59 years, male 65.0
GTEX-1I1GR-0011-R4a-SM-CMKHC 60-69 years, male 62.9
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AMYGDALA - FANTOM5 CAGEi
Max Scaled Tags Per Million 18.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 18.8
FF:10151-102I7 76 years, female 18.8

AMYGDALA - Pig RNA-seqi
Average nTPM 17.3
Pig sample Sample description nTPM
Amygdala
nTPM: 17.3
Samples: 4

Max nTPM: 23.6
Min nTPM: 14.4
Sample A Female 14.4
Sample B Female 23.6
Sample C Male 16.1
Sample D Male 15.1

AMYGDALA - Mouse RNA-seqi
Average nTPM 26.0
Mouse sample Sample description nTPM
Amygdala
nTPM: 26.0
Samples: 4

Max nTPM: 36.6
Min nTPM: 21.9
Sample A Male 21.9
Sample B Male 22.5
Sample C Female 36.6
Sample D Female 23.0

AMYGDALA - Allen Mouse ISHi
Max Expression energy 13.4
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 13.4
70565891 Antisense, RP_050628_01_F02, Mouse strain C57BL/6J (56 days, male) 13.4

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.