HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:38.2 nTPM
HPA:38.2 nTPM
GTEx:27.7 nTPM
FANTOM5:23.5 Scaled Tags Per Million
Pig:16.5 nTPM
Mouse:69.6 nTPM
Allen mouse:1.0 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 38.2
Sample id Sample description nTPM
Hippocampus
nTPM: 34.5
1855 Male, age 76, left hemisphere 38.0
2529 Female, age 94, left hemisphere 37.1
1911 Female, age 85, right hemisphere 36.0
2621 Female, age 67, right hemisphere 34.8
1898 Male, age 80, left hemisphere 32.5
2148 Female, age 91, left hemisphere 28.6
Dentate gyrus
nTPM: 34.5
2531 Female, age 67, both hemispheres 42.1
1927 Female, age 91, both hemispheres 35.6
2010 Male, age 76, both hemispheres 34.6
2530 Female, age 94, left hemisphere 34.0
2246 Female, age 85, both hemispheres 32.6
2528 Male, age 74, both hemispheres 27.9
Entorhinal gyrus
nTPM: 33.4
1787 Male, age 76, left hemisphere 38.1
1938 Female, age 85, left hemisphere 33.9
2764 Male, age 80, right hemisphere 33.4
2117 Female, age 91, right hemisphere 32.6
2613 Female, age 94, left hemisphere 31.2
2686 Male, age 75, right hemisphere 31.2
Hippocampus, CA1
nTPM: 35.0
2045 Male, age 76, both hemispheres 38.1
2527 Male, age 74, both hemispheres 35.4
1873 Female, age 85, both hemispheres 35.2
2749 Male, age 80, left hemisphere 34.4
2082 Female, age 91, right hemisphere 31.6
Hippocampus, CA2
nTPM: 33.0
2437 Female, age 94, left hemisphere 43.6
1892 Male, age 76, both hemispheres 36.4
1940 Female, age 85, left hemisphere 32.9
2113 Female, age 91, right hemisphere 30.9
2249 Male, age 74, both hemispheres 27.9
1963 Male, age 80, left hemisphere 26.3
Hippocampus, CA3
nTPM: 34.8
2620 Female, age 94, left hemisphere 37.7
1891 Female, age 85, both hemispheres 37.6
2436 Male, age 74, both hemispheres 36.8
1867 Male, age 76, both hemispheres 35.3
2861 Female, age 67, both hemispheres 32.3
2137 Male, age 80, left hemisphere 28.9
Parahippocampal cortex
nTPM: 34.3
2018 Male, age 76, both hemispheres 40.3
1850 Male, age 80, both hemispheres 39.3
1933 Female, age 85, both hemispheres 38.4
2622 Female, age 67, right hemisphere 34.8
2693 Female, age 94, both hemispheres 33.9
2250 Female, age 67, right hemisphere 33.0
2532 Female, age 72, left hemisphere 33.0
2245 Female, age 91, both hemispheres 32.4
1990 Female, age 91, right hemisphere 29.2
2692 Male, age 74, both hemispheres 29.1
Perirhinal gyrus
nTPM: 38.2
1794 Male, age 80, right hemisphere 43.7
1847 Female, age 91, left hemisphere 41.9
1841 Female, age 85, right hemisphere 39.5
2521 Female, age 94, right hemisphere 35.1
2848 Male, age 76, right hemisphere 30.6
Subiculum
nTPM: 33.8
2042 Male, age 76, both hemispheres 37.9
1901 Male, age 80, both hemispheres 36.3
2438 Female, age 94, left hemisphere 35.0
1977 Female, age 85, both hemispheres 32.6
2729 Female, age 91, right hemisphere 32.5
2619 Male, age 74, both hemispheres 28.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 27.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 27.7
Samples: 197

Max nTPM: 43.5
Min nTPM: 15.0
Std nTPM: 4.5
Median nTPM: 27.4
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 43.5
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 42.1
GTEX-QDT8-0011-R1A-SM-32PKS 30-39 years, female 40.2
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 39.3
GTEX-TSE9-0011-R1A-SM-3DB7E 60-69 years, female 38.4
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 38.0
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 37.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 37.7
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 36.6
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 36.4
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 35.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 23.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 23.5
FF:10169-103B7 60 years, female 26.1
FF:10153-102I9 76 years, female 20.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 16.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 16.5
Samples: 4

Max nTPM: 18.0
Min nTPM: 15.1
Sample A Female 17.5
Sample B Female 15.3
Sample C Male 18.0
Sample D Male 15.1
Entorhinal cortex
nTPM: 15.1
Samples: 4

Max nTPM: 17.5
Min nTPM: 13.2
Sample A Female 15.9
Sample B Female 17.5
Sample C Male 13.2
Sample D Male 13.8
Subiculum
nTPM: 15.0
Samples: 4

Max nTPM: 18.8
Min nTPM: 12.1
Sample A Female 18.8
Sample B Female 14.9
Sample C Male 14.0
Sample D Male 12.1
Ventral hippocampus
nTPM: 15.4
Samples: 4

Max nTPM: 16.7
Min nTPM: 14.1
Sample A Female 16.4
Sample B Female 14.1
Sample C Male 16.7
Sample D Male 14.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 69.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 64.3
Samples: 4

Max nTPM: 69.8
Min nTPM: 53.8
Sample A Male 66.9
Sample B Male 66.5
Sample C Female 69.8
Sample D Female 53.8
Hippocampal formation
nTPM: 69.6
Samples: 4

Max nTPM: 77.5
Min nTPM: 61.4
Sample A Male 77.5
Sample B Male 61.4
Sample C Female 71.0
Sample D Female 68.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.0
69817300 Antisense, RP_050510_03_A11, Mouse strain C57BL/6J (56 days, male) 1.0

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