HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:1197.9 nTPM
HPA:1197.9 nTPM
GTEx:846.5 nTPM
FANTOM5:45.4 Scaled Tags Per Million
Pig:78.0 nTPM
Mouse:1011.8 nTPM
Allen mouse:1.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA055060
Glial cells Medium
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 1197.9
Sample id Sample description nTPM
Hippocampus
nTPM: 1197.9
2621 Female, age 67, right hemisphere 1212.8
2529 Female, age 94, left hemisphere 1207.2
1898 Male, age 80, left hemisphere 1202.3
1911 Female, age 85, right hemisphere 1197.6
1855 Male, age 76, left hemisphere 1193.0
2148 Female, age 91, left hemisphere 1174.4
Dentate gyrus
nTPM: 1192.3
2530 Female, age 94, left hemisphere 1239.5
2010 Male, age 76, both hemispheres 1202.2
2246 Female, age 85, both hemispheres 1190.7
2531 Female, age 67, both hemispheres 1190.6
1927 Female, age 91, both hemispheres 1170.7
2528 Male, age 74, both hemispheres 1160.2
Entorhinal gyrus
nTPM: 1178.6
2686 Male, age 75, right hemisphere 1210.9
1787 Male, age 76, left hemisphere 1188.4
2117 Female, age 91, right hemisphere 1179.3
1938 Female, age 85, left hemisphere 1170.2
2764 Male, age 80, right hemisphere 1165.8
2613 Female, age 94, left hemisphere 1156.8
Hippocampus, CA1
nTPM: 1183.8
2749 Male, age 80, left hemisphere 1195.0
2045 Male, age 76, both hemispheres 1190.1
1873 Female, age 85, both hemispheres 1186.9
2527 Male, age 74, both hemispheres 1179.9
2082 Female, age 91, right hemisphere 1166.9
Hippocampus, CA2
nTPM: 1184.8
1892 Male, age 76, both hemispheres 1203.3
2437 Female, age 94, left hemisphere 1197.5
1963 Male, age 80, left hemisphere 1188.2
1940 Female, age 85, left hemisphere 1182.7
2249 Male, age 74, both hemispheres 1170.0
2113 Female, age 91, right hemisphere 1167.2
Hippocampus, CA3
nTPM: 1185.5
1867 Male, age 76, both hemispheres 1217.7
1891 Female, age 85, both hemispheres 1199.3
2861 Female, age 67, both hemispheres 1184.3
2436 Male, age 74, both hemispheres 1182.1
2137 Male, age 80, left hemisphere 1179.6
2620 Female, age 94, left hemisphere 1150.3
Parahippocampal cortex
nTPM: 1178.6
2018 Male, age 76, both hemispheres 1221.9
2532 Female, age 72, left hemisphere 1193.4
2245 Female, age 91, both hemispheres 1181.4
1850 Male, age 80, both hemispheres 1180.4
2692 Male, age 74, both hemispheres 1175.8
2250 Female, age 67, right hemisphere 1174.4
1933 Female, age 85, both hemispheres 1171.3
1990 Female, age 91, right hemisphere 1167.6
2622 Female, age 67, right hemisphere 1167.4
2693 Female, age 94, both hemispheres 1151.9
Perirhinal gyrus
nTPM: 1182.0
1841 Female, age 85, right hemisphere 1209.4
2848 Male, age 76, right hemisphere 1188.4
1794 Male, age 80, right hemisphere 1177.5
1847 Female, age 91, left hemisphere 1171.2
2521 Female, age 94, right hemisphere 1163.6
Subiculum
nTPM: 1195.9
2042 Male, age 76, both hemispheres 1224.9
2438 Female, age 94, left hemisphere 1221.2
1901 Male, age 80, both hemispheres 1202.2
1977 Female, age 85, both hemispheres 1193.3
2619 Male, age 74, both hemispheres 1170.3
2729 Female, age 91, right hemisphere 1163.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 846.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 846.5
Samples: 197

Max nTPM: 1999.8
Min nTPM: 354.1
Std nTPM: 294.7
Median nTPM: 782.4
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 1999.8
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 1884.3
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 1801.6
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 1751.5
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 1632.4
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 1579.9
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 1579.8
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 1560.8
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 1550.5
GTEX-17HII-0011-R1b-SM-7MGVW 50-59 years, male 1469.7
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 1467.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 45.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 45.4
FF:10169-103B7 60 years, female 58.5
FF:10153-102I9 76 years, female 32.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 78.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 78.0
Samples: 4

Max nTPM: 102.5
Min nTPM: 50.7
Sample A Female 102.5
Sample B Female 64.9
Sample C Male 94.0
Sample D Male 50.7
Entorhinal cortex
nTPM: 71.0
Samples: 4

Max nTPM: 89.7
Min nTPM: 52.3
Sample A Female 62.5
Sample B Female 89.7
Sample C Male 79.3
Sample D Male 52.3
Subiculum
nTPM: 70.0
Samples: 4

Max nTPM: 101.7
Min nTPM: 54.6
Sample A Female 101.7
Sample B Female 67.6
Sample C Male 54.6
Sample D Male 55.9
Ventral hippocampus
nTPM: 64.6
Samples: 4

Max nTPM: 72.1
Min nTPM: 61.1
Sample A Female 72.1
Sample B Female 61.4
Sample C Male 63.8
Sample D Male 61.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 1011.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 881.7
Samples: 4

Max nTPM: 961.9
Min nTPM: 844.6
Sample A Male 858.1
Sample B Male 862.3
Sample C Female 961.9
Sample D Female 844.6
Hippocampal formation
nTPM: 1011.8
Samples: 4

Max nTPM: 1082.2
Min nTPM: 916.4
Sample A Male 1076.3
Sample B Male 916.4
Sample C Female 1082.2
Sample D Female 972.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.1
71763583 Antisense, RP_050921_02_C07, Mouse strain C57BL/6J (56 days, male) 1.1

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