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RPS17
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TISSUE PRIMARY DATA SMALL INTESTINE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Small intestine
Tissue proteome
Intestine
SMALL INTESTINE - Expression summary
Protein expression
Small intestinei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glandular cells: Medium
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:1319.4 nTPM
HPA:1225.0 nTPM
GTEx:1319.4 nTPM
FANTOM5:47.8 Scaled Tags Per Million

SMALL INTESTINE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA055060
Glandular cells Medium



SMALL INTESTINE - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Read more
Average nTPM 1225.0
overview
Male, age 65
Small intestine sample 232
nTPM: 1573.6
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40

overview
Male, age 39
Small intestine sample 233
nTPM: 1178
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55

overview
Male, age 68
Small intestine sample 234
nTPM: 1111.4
Cell types%
Glandular cells:
30

Smooth muscle cells:
15

Other cell types:
55

N/A
Male, age 85
Small intestine sample 235
nTPM: 1037

SMALL INTESTINE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 1319.4
GTEx sample id Sample description nTPM
Small Intestine - Terminal Ileum
Average nTPM: 1319.4
Samples: 187

Max nTPM: 3185.4
Min nTPM: 623.4
Std nTPM: 411.4
Median nTPM: 1260.2
GTEX-1EMGI-2826-SM-7IGMR 60-69 years, male 3185.4
GTEX-1NSGN-2126-SM-DPRYN 50-59 years, male 2690.8
GTEX-1MGNQ-2326-SM-EV7BG 40-49 years, male 2554.9
GTEX-1RAZQ-2226-SM-DPRZR 30-39 years, male 2528.0
GTEX-1JJE9-2226-SM-CXZJM 70-79 years, male 2437.3
GTEX-Y5V5-1826-SM-4VDS5 60-69 years, female 2363.8
GTEX-1PIEJ-1526-SM-E6CP8 20-29 years, female 2286.5
GTEX-1GL5R-2026-SM-7MKHP 50-59 years, male 2273.6
GTEX-16A39-1426-SM-6LLI6 30-39 years, female 2095.4
GTEX-1R9K4-2326-SM-E6CRB 60-69 years, male 2070.5
GTEX-1OJC3-1626-SM-E9U65 20-29 years, male 2018.3
GTEX-1QP28-1726-SM-E6CRK 50-59 years, female 1984.4
GTEX-183FY-1626-SM-793D8 20-29 years, male 1963.8
GTEX-1GMR3-2726-SM-7MKFB 40-49 years, male 1912.2
GTEX-11VI4-1626-SM-5EQKO 40-49 years, female 1902.5
GTEX-1IKOE-1926-SM-ARU7V 30-39 years, female 1898.0
GTEX-1RAZA-1826-SM-DTXA2 20-29 years, male 1891.8
GTEX-1PDJ9-1826-SM-E9U66 20-29 years, male 1878.9
GTEX-1399U-2126-SM-5IFEZ 50-59 years, female 1872.3
GTEX-16NGA-1126-SM-7KFSY 40-49 years, female 1850.6
GTEX-148VJ-2226-SM-5NQ9M 70-79 years, male 1820.1
GTEX-14XAO-1926-SM-6ETZO 60-69 years, female 1811.9
GTEX-1JMQK-2426-SM-CXZJU 60-69 years, male 1808.0
GTEX-1CB4F-1826-SM-7MGXI 60-69 years, male 1801.7
GTEX-VUSG-1726-SM-4KKZL 50-59 years, male 1764.0
GTEX-WRHK-1026-SM-4MVOD 20-29 years, female 1757.9
GTEX-Y5LM-1626-SM-4VDTB 40-49 years, female 1745.2
GTEX-11TUW-1926-SM-5BC58 60-69 years, male 1737.5
GTEX-1S5ZA-1326-SM-EV7BB 20-29 years, male 1708.7
GTEX-1K9T9-2726-SM-D4P3E 50-59 years, female 1681.0
GTEX-1QPFJ-2626-SM-DPRZU 30-39 years, female 1680.1
GTEX-1H11D-2526-SM-9JGGU 40-49 years, male 1669.3
GTEX-1L5NE-1826-SM-EV79T 50-59 years, male 1646.8
GTEX-1LH75-1926-SM-DIPGD 50-59 years, female 1645.1
GTEX-14PK6-1626-SM-6871I 70-79 years, female 1642.3
GTEX-1LBAC-1526-SM-CXZKU 20-29 years, male 1608.0
GTEX-1LGOU-1426-SM-D3L8N 20-29 years, female 1593.3
GTEX-X15G-1426-SM-4PQZK 50-59 years, female 1592.2
GTEX-13W3W-2026-SM-5K7UL 60-69 years, female 1579.1
GTEX-WH7G-1626-SM-4LVMY 40-49 years, male 1544.8
GTEX-Y3I4-1326-SM-4TT8Z 50-59 years, male 1533.5
GTEX-Y3IK-1726-SM-4YCCR 50-59 years, female 1533.2
GTEX-1KXAM-2026-SM-DHXKI 60-69 years, male 1522.8
GTEX-17MFQ-1026-SM-7KFSZ 20-29 years, male 1510.4
GTEX-VJYA-0926-SM-4KL1N 60-69 years, male 1510.4
GTEX-1OKEX-1126-SM-DTXEB 60-69 years, male 1503.9
GTEX-11P82-0826-SM-5P9GU 20-29 years, male 1496.7
GTEX-1R7EV-1226-SM-DTX82 40-49 years, male 1489.7
GTEX-1F75I-2526-SM-9WPOZ 40-49 years, male 1482.8
GTEX-15DZA-0826-SM-6AJBF 30-39 years, female 1473.6
GTEX-UPK5-2026-SM-4JBIM 40-49 years, male 1472.3
GTEX-13FH7-1226-SM-5IJFK 50-59 years, female 1470.4
GTEX-13O61-1326-SM-5KM31 60-69 years, male 1460.5
GTEX-18QFQ-1626-SM-72D7H 30-39 years, male 1453.7
GTEX-1RAZR-1826-SM-E6CRE 40-49 years, male 1439.1
GTEX-1I1GT-1826-SM-ARZLW 60-69 years, female 1426.3
GTEX-1S82Z-1826-SM-E9TIK 30-39 years, female 1416.5
GTEX-13RTK-0826-SM-5Q5C6 20-29 years, male 1415.8
GTEX-12BJ1-1926-SM-5HL9Z 60-69 years, male 1414.3
GTEX-X5EB-1626-SM-4E3IV 40-49 years, male 1409.5
GTEX-13NYB-1826-SM-5J1N3 40-49 years, male 1408.1
GTEX-ZA64-1226-SM-5HL7B 20-29 years, male 1407.0
GTEX-14PKU-1626-SM-6871C 40-49 years, female 1403.9
GTEX-1AX8Z-2526-SM-731E3 60-69 years, male 1396.5
GTEX-1192X-2526-SM-59868 50-59 years, male 1396.0
GTEX-1MUQO-2426-SM-EAZ5A 60-69 years, male 1381.3
GTEX-14E6E-1626-SM-5RQI7 30-39 years, male 1377.8
GTEX-ZC5H-2326-SM-4WAYT 40-49 years, female 1377.8
GTEX-1GMR2-1026-SM-7MKHJ 50-59 years, male 1372.0
GTEX-1J8QM-1026-SM-C1YQA 60-69 years, female 1369.2
GTEX-Z9EW-0926-SM-5CVMM 40-49 years, male 1362.9
GTEX-1C475-1426-SM-793CH 40-49 years, female 1360.0
GTEX-1BAJH-2526-SM-7IGOT 70-79 years, male 1359.8
GTEX-ZLFU-1526-SM-4WWBT 40-49 years, male 1354.9
GTEX-WEY5-1526-SM-4LMJF 40-49 years, female 1352.6
GTEX-131XG-1726-SM-5LZUR 50-59 years, female 1351.1
GTEX-117YX-0326-SM-5GICL 50-59 years, male 1335.2
GTEX-145ME-0926-SM-5O9AR 40-49 years, female 1333.7
GTEX-14C39-1826-SM-5ZZW4 40-49 years, male 1328.4
GTEX-1R9JW-1926-SM-EVR4J 30-39 years, female 1325.5
GTEX-11NSD-1726-SM-5N9C3 20-29 years, male 1319.1
GTEX-ZG7Y-1926-SM-DNZZ5 50-59 years, male 1310.4
GTEX-WFJO-0926-SM-4LVM2 30-39 years, male 1308.1
GTEX-ZVP2-1726-SM-5GU5P 50-59 years, male 1298.2
GTEX-ZEX8-1826-SM-57WBH 50-59 years, male 1294.0
GTEX-1HSMQ-2226-SM-C1YRD 50-59 years, male 1293.2
GTEX-14BMU-1426-SM-5TDE5 20-29 years, female 1279.6
GTEX-1H1DE-1426-SM-9JGHV 20-29 years, male 1277.0
GTEX-13CF3-1226-SM-5LZXN 60-69 years, female 1275.5
GTEX-14PKV-2026-SM-6AJ9A 20-29 years, female 1273.8
GTEX-ZTPG-2626-SM-57WFX 20-29 years, female 1267.4
GTEX-13X6H-1826-SM-7EWCZ 50-59 years, female 1262.8
GTEX-139T6-1026-SM-5IJGC 50-59 years, male 1260.6
GTEX-ZPIC-2326-SM-57WDW 40-49 years, female 1260.2
GTEX-15EU6-1826-SM-7PC1W 50-59 years, male 1260.2
GTEX-139YR-2226-SM-5IFFW 50-59 years, male 1251.0
GTEX-1JN76-1126-SM-C1YRL 20-29 years, female 1247.8
GTEX-17KNJ-1626-SM-718AL 50-59 years, male 1237.2
GTEX-ZAB5-1526-SM-5HL9P 50-59 years, male 1236.7
GTEX-18A66-2526-SM-7KFTZ 60-69 years, male 1232.2
GTEX-1B8KZ-1126-SM-7IGLX 50-59 years, male 1231.6
GTEX-13OVI-1926-SM-5IJCG 60-69 years, female 1228.2
GTEX-ZLWG-1626-SM-DNZZ1 50-59 years, female 1218.0
GTEX-1QP2A-2426-SM-EXOJA 50-59 years, male 1203.5
GTEX-ZP4G-1626-SM-57WGD 20-29 years, female 1201.9
GTEX-1QW4Y-1226-SM-EWRMY 30-39 years, male 1198.9
GTEX-XMK1-1826-SM-4B66F 40-49 years, male 1198.4
GTEX-13QBU-1926-SM-5IJEW 40-49 years, female 1193.5
GTEX-ZF29-1626-SM-4WKFJ 60-69 years, female 1183.1
GTEX-11XUK-1426-SM-5EQMG 40-49 years, female 1180.0
GTEX-XPVG-1726-SM-4B65W 50-59 years, male 1172.0
GTEX-XGQ4-1326-SM-4GIDU 50-59 years, male 1171.1
GTEX-1CAMR-0826-SM-7MKFK 20-29 years, male 1166.6
GTEX-15G1A-1726-SM-6LPI4 30-39 years, male 1153.5
GTEX-1JK1U-1226-SM-CNNPN 60-69 years, male 1151.3
GTEX-1R9PM-1626-SM-DPRY9 20-29 years, male 1144.4
GTEX-1QCLZ-2126-SM-EWRNC 60-69 years, female 1137.8
GTEX-WFG8-1626-SM-4LVMB 20-29 years, male 1136.5
GTEX-17HHE-1726-SM-79OKT 50-59 years, male 1128.6
GTEX-12WSK-1526-SM-5CVNO 40-49 years, female 1128.3
GTEX-ZZ64-0526-SM-5GZXM 20-29 years, male 1123.4
GTEX-111CU-1326-SM-5NQ8L 50-59 years, male 1122.0
GTEX-11DXZ-1326-SM-5H11X 50-59 years, male 1119.1
GTEX-ZQUD-0926-SM-57WE3 30-39 years, male 1109.2
GTEX-Y111-2226-SM-4SOJB 50-59 years, male 1103.8
GTEX-1R7EU-1326-SM-E6CQ6 60-69 years, male 1099.0
GTEX-13111-1426-SM-5DUW3 50-59 years, male 1095.6
GTEX-16AAH-1426-SM-7KFTR 50-59 years, male 1090.4
GTEX-ZVT2-2126-SM-5NQ93 50-59 years, female 1085.6
GTEX-1B8KE-1726-SM-7IGMN 50-59 years, male 1084.6
GTEX-131XE-0926-SM-5HL7J 50-59 years, male 1083.9
GTEX-WFG7-1726-SM-4LVME 20-29 years, male 1081.2
GTEX-1C64O-2526-SM-79ONO 60-69 years, male 1078.3
GTEX-11I78-1126-SM-5A5K5 50-59 years, female 1071.2
GTEX-ZYFG-2026-SM-5E43Y 60-69 years, female 1064.4
GTEX-1CAMS-2426-SM-7DHMV 40-49 years, female 1053.9
GTEX-1399R-2026-SM-5K7WN 30-39 years, male 1045.0
GTEX-Y114-1426-SM-4TT6W 50-59 years, female 1044.1
GTEX-131XF-1326-SM-5GCMQ 60-69 years, male 1041.5
GTEX-133LE-1426-SM-5IFH1 20-29 years, female 1036.3
GTEX-14PJ3-1326-SM-664O7 50-59 years, male 1035.6
GTEX-14DAR-1426-SM-5RQIR 50-59 years, male 1033.7
GTEX-13113-1226-SM-5EGHT 60-69 years, female 1033.4
GTEX-11P7K-1626-SM-5GU63 30-39 years, male 1028.3
GTEX-11DXX-1626-SM-5H11H 60-69 years, female 1026.1
GTEX-1399S-2026-SM-5KM4B 30-39 years, female 1022.9
GTEX-WYJK-1526-SM-4ONCW 50-59 years, male 1016.6
GTEX-ZQG8-2526-SM-57WEQ 60-69 years, female 1009.8
GTEX-ZXES-1526-SM-5NQ95 30-39 years, female 1007.5
GTEX-XBED-1426-SM-4AT4G 60-69 years, male 1001.5
GTEX-XXEK-1026-SM-4BRUW 50-59 years, male 1000.8
GTEX-XUZC-1426-SM-4BRV3 30-39 years, female 997.4
GTEX-1497J-1926-SM-5TDCC 60-69 years, male 995.4
GTEX-WFON-1526-SM-4LVMP 40-49 years, male 994.2
GTEX-11LCK-1926-SM-5A5KE 30-39 years, male 985.2
GTEX-144GM-1026-SM-79OKU 20-29 years, male 962.5
GTEX-YEC4-1726-SM-4W21E 40-49 years, male 948.0
GTEX-WHSB-1026-SM-4M1XN 50-59 years, male 942.2
GTEX-WQUQ-2426-SM-4MVNW 60-69 years, male 938.0
GTEX-16MTA-1526-SM-6LPJB 50-59 years, male 926.5
GTEX-ZF2S-1726-SM-57WFT 50-59 years, female 923.8
GTEX-13O21-1026-SM-5IJDU 50-59 years, male 906.6
GTEX-1R9K5-2026-SM-E6CPS 50-59 years, male 902.3
GTEX-13D11-0726-SM-5LZZB 50-59 years, female 899.1
GTEX-XAJ8-0526-SM-47JYK 40-49 years, male 886.5
GTEX-14PN3-2026-SM-68729 60-69 years, female 885.1
GTEX-13FTW-2026-SM-5IJE2 40-49 years, male 876.2
GTEX-Y9LG-1626-SM-5IFHM 30-39 years, male 872.3
GTEX-14PJN-0826-SM-686ZL 30-39 years, male 866.3
GTEX-ZLV1-1126-SM-4WWBW 60-69 years, female 864.0
GTEX-YB5E-1526-SM-5IFIE 40-49 years, male 854.3
GTEX-ZTX8-0526-SM-59HLD 20-29 years, male 845.2
GTEX-13PL7-2626-SM-5IFH4 60-69 years, female 840.8
GTEX-11EQ9-1326-SM-5985X 30-39 years, male 833.9
GTEX-14PJ6-1726-SM-6AJBN 60-69 years, female 825.7
GTEX-1AMFI-1926-SM-731F2 50-59 years, female 823.4
GTEX-145LT-1026-SM-5LU9O 40-49 years, male 818.5
GTEX-ZPCL-1726-SM-57WEO 60-69 years, female 792.6
GTEX-1122O-1326-SM-5H11F 60-69 years, female 784.8
GTEX-ZDTT-1726-SM-5HL69 60-69 years, male 773.9
GTEX-YFCO-1326-SM-664NV 40-49 years, male 771.1
GTEX-111YS-1426-SM-5GID8 60-69 years, male 738.2
GTEX-YF7O-1826-SM-5IFIU 50-59 years, male 710.4
GTEX-ZVZP-1826-SM-5GZXB 50-59 years, male 699.1
GTEX-1J8Q3-2526-SM-CNNQ4 60-69 years, male 653.7
GTEX-WY7C-1826-SM-4ONCE 50-59 years, male 653.0
GTEX-ZTSS-0926-SM-59865 40-49 years, male 623.4
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SMALL INTESTINE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 47.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Small intestine
Scaled Tags Per Million: 47.8
FF:10024-101D6 15,40,85 years, mixed 47.8

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