AMYGDALA - Expression summary
Mouse brain, Intensity
Amygdalai 		51.451
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:94.6 nTPM
HPA:94.6 nTPM
GTEx:91.7 nTPM
FANTOM5:142.4 Scaled Tags Per Million
Pig:107.4 nTPM
Mouse:152.6 nTPM
Allen mouse:8.7 Expression energy

AMYGDALA - Mouse brain profilei , antibody HPA041690
Amygdala mean intensity 51.451
intensityi
FRONT BACK
Nucleus of the lateral olfactory tract 39.922
Basal medial amygdaloid nucleus 34.934
Basal lateral amygdala* -
Basal lateral amygdaloid nucleus 26.219
Cortical amygdala 33.994
Central amygdala 37.823
Medial amygdaloid nucleus 30.959

AMYGDALA - HPA Brain RNA-seq
Max nTPM 94.6
Sample id Sample description nTPM
Amygdala
nTPM: 93.4
2695 Female, age 67, right hemisphere 113.8
2814 Male, age 76, right hemisphere 95.7
1987 Female, age 91, left hemisphere 90.3
2514 Male, age 75, right hemisphere 86.3
2517 Female, age 94, left hemisphere 81.1
Basal amygdala
nTPM: 76.0
2609 Male, age 75, right hemisphere 104.2
2243 Female, age 91, right hemisphere 83.4
1955 Male, age 76, both hemispheres 76.1
2110 Male, age 80, left hemisphere 70.8
2685 Female, age 94, left hemisphere 67.1
2827 Female, age 67, right hemisphere 54.5
Central amygdala
nTPM: 85.9
1905 Male, age 76, both hemispheres 105.5
2515 Male, age 75, right hemisphere 90.8
2701 Female, age 91, right hemisphere 90.3
2239 Male, age 80, left hemisphere 74.6
2826 Female, age 94, left hemisphere 68.3
Corticomedial amygdala
nTPM: 77.8
2428 Male, age 75, right hemisphere 94.7
2242 Female, age 91, right hemisphere 83.0
2829 Male, age 80, left hemisphere 81.2
2240 Male, age 76, both hemispheres 80.2
2429 Female, age 94, left hemisphere 71.2
2535 Female, age 67, right hemisphere 56.5
Lateral amygdala
nTPM: 74.1
2516 Male, age 75, right hemisphere 91.4
1883 Male, age 76, both hemispheres 88.4
2255 Female, age 91, right hemisphere 78.3
2534 Female, age 94, left hemisphere 69.0
2256 Male, age 80, left hemisphere 64.5
2830 Female, age 67, right hemisphere 52.7
Stria terminalis, bed nucleus
nTPM: 94.6
2201 Male, age 74, unknown 106.4
1974 Female, age 91, both hemispheres 90.1
2486 Female, age 94, both hemispheres 87.3

AMYGDALA - GTEx RNA-seqi
Average nTPM 91.7
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 91.7
Samples: 152

Max nTPM: 177.9
Min nTPM: 5.3
Std nTPM: 26.8
Median nTPM: 88.9
GTEX-P44G-0011-R4A-SM-2I3FB 30-39 years, male 177.9
GTEX-11ZU8-0011-R4a-SM-5BC6Y 60-69 years, male 170.5
GTEX-R55E-0011-R4A-SM-2TC5H 20-29 years, male 153.0
GTEX-14JG1-0011-R4b-SM-62LEB 40-49 years, male 146.9
GTEX-15DCD-0011-R4a-SM-69LPB 70-79 years, female 144.1
GTEX-13RTJ-0011-R4b-SM-5PNX1 60-69 years, male 142.5
GTEX-1GTWX-0011-R4a-SM-C1YQI 60-69 years, male 141.0
GTEX-15ER7-0011-R4a-SM-6M46S 20-29 years, female 136.7
GTEX-16YQH-0011-R4a-SM-7EPGI 30-39 years, male 133.8
GTEX-12WSA-0011-R4a-SM-57WB7 60-69 years, male 132.8
GTEX-14JIY-0011-R4b-SM-5ZZV7 60-69 years, male 131.8
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AMYGDALA - FANTOM5 CAGEi
Max Scaled Tags Per Million 142.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 142.4
FF:10151-102I7 76 years, female 142.4

AMYGDALA - Pig RNA-seqi
Average nTPM 107.4
Pig sample Sample description nTPM
Amygdala
nTPM: 107.4
Samples: 4

Max nTPM: 113.2
Min nTPM: 101.8
Sample A Female 113.2
Sample B Female 101.8
Sample C Male 106.3
Sample D Male 108.3

AMYGDALA - Mouse RNA-seqi
Average nTPM 152.6
Mouse sample Sample description nTPM
Amygdala
nTPM: 152.7
Samples: 4

Max nTPM: 170.0
Min nTPM: 134.2
Sample A Male 155.3
Sample B Male 134.2
Sample C Female 170.0
Sample D Female 151.1

AMYGDALA - Allen Mouse ISHi
Max Expression energy 8.7
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 8.7
72079931 Antisense, RP_051017_03_B07, Mouse strain C57BL/6J (56 days, male) 11.5
68918934 Antisense, RP_050301_02_C02, Mouse strain C57BL/6J (56 days, male) 6.0

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.