HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:45.6 nTPM
HPA:45.6 nTPM
GTEx:34.7 nTPM
FANTOM5:37.5 Scaled Tags Per Million
Pig:28.0 nTPM
Mouse:20.8 nTPM
Allen mouse:0.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA058975
Glial cells Not detected
Neuronal cells Not detected


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 45.6
Sample id Sample description nTPM
Hippocampus
nTPM: 40.1
2529 Female, age 94, left hemisphere 43.5
1898 Male, age 80, left hemisphere 42.2
2148 Female, age 91, left hemisphere 39.9
1911 Female, age 85, right hemisphere 39.6
1855 Male, age 76, left hemisphere 37.7
2621 Female, age 67, right hemisphere 37.4
Dentate gyrus
nTPM: 38.5
2528 Male, age 74, both hemispheres 41.5
2530 Female, age 94, left hemisphere 41.4
2246 Female, age 85, both hemispheres 39.6
2531 Female, age 67, both hemispheres 36.8
2010 Male, age 76, both hemispheres 36.5
1927 Female, age 91, both hemispheres 35.2
Entorhinal gyrus
nTPM: 45.6
1938 Female, age 85, left hemisphere 55.9
1787 Male, age 76, left hemisphere 49.2
2764 Male, age 80, right hemisphere 43.5
2117 Female, age 91, right hemisphere 42.6
2613 Female, age 94, left hemisphere 42.4
2686 Male, age 75, right hemisphere 40.1
Hippocampus, CA1
nTPM: 36.9
2527 Male, age 74, both hemispheres 40.3
2082 Female, age 91, right hemisphere 38.4
2045 Male, age 76, both hemispheres 36.3
2749 Male, age 80, left hemisphere 35.2
1873 Female, age 85, both hemispheres 34.4
Hippocampus, CA2
nTPM: 40.9
1892 Male, age 76, both hemispheres 44.2
2437 Female, age 94, left hemisphere 42.7
2249 Male, age 74, both hemispheres 41.4
2113 Female, age 91, right hemisphere 40.4
1940 Female, age 85, left hemisphere 38.8
1963 Male, age 80, left hemisphere 37.7
Hippocampus, CA3
nTPM: 41.5
1867 Male, age 76, both hemispheres 47.7
1891 Female, age 85, both hemispheres 44.2
2436 Male, age 74, both hemispheres 41.2
2861 Female, age 67, both hemispheres 40.2
2137 Male, age 80, left hemisphere 38.4
2620 Female, age 94, left hemisphere 37.2
Parahippocampal cortex
nTPM: 42.5
1990 Female, age 91, right hemisphere 52.6
1933 Female, age 85, both hemispheres 46.4
2250 Female, age 67, right hemisphere 43.5
1850 Male, age 80, both hemispheres 42.9
2245 Female, age 91, both hemispheres 41.7
2692 Male, age 74, both hemispheres 41.2
2018 Male, age 76, both hemispheres 40.1
2532 Female, age 72, left hemisphere 39.5
2693 Female, age 94, both hemispheres 38.9
2622 Female, age 67, right hemisphere 38.1
Perirhinal gyrus
nTPM: 43.1
1847 Female, age 91, left hemisphere 50.4
1841 Female, age 85, right hemisphere 43.2
2521 Female, age 94, right hemisphere 41.2
1794 Male, age 80, right hemisphere 41.0
2848 Male, age 76, right hemisphere 39.7
Subiculum
nTPM: 43.2
1977 Female, age 85, both hemispheres 50.3
1901 Male, age 80, both hemispheres 43.4
2438 Female, age 94, left hemisphere 43.2
2619 Male, age 74, both hemispheres 42.2
2729 Female, age 91, right hemisphere 41.6
2042 Male, age 76, both hemispheres 38.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 34.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 34.7
Samples: 197

Max nTPM: 68.4
Min nTPM: 13.4
Std nTPM: 10.0
Median nTPM: 34.3
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 68.4
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 67.9
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 61.7
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 59.5
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 59.4
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 55.8
GTEX-YJ89-0011-R1a-SM-4RGLS 60-69 years, male 55.3
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 52.4
GTEX-1F75W-0011-R1a-SM-ARU81 60-69 years, male 52.2
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 51.9
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 51.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 37.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 37.5
FF:10153-102I9 76 years, female 48.9
FF:10169-103B7 60 years, female 26.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 28.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 20.0
Samples: 4

Max nTPM: 21.9
Min nTPM: 17.8
Sample A Female 21.9
Sample B Female 18.4
Sample C Male 21.7
Sample D Male 17.8
Entorhinal cortex
nTPM: 24.7
Samples: 4

Max nTPM: 26.2
Min nTPM: 21.0
Sample A Female 26.0
Sample B Female 25.6
Sample C Male 26.2
Sample D Male 21.0
Subiculum
nTPM: 28.0
Samples: 4

Max nTPM: 33.1
Min nTPM: 24.7
Sample A Female 33.1
Sample B Female 27.4
Sample C Male 24.7
Sample D Male 26.7
Ventral hippocampus
nTPM: 23.2
Samples: 4

Max nTPM: 26.8
Min nTPM: 18.6
Sample A Female 25.1
Sample B Female 22.2
Sample C Male 26.8
Sample D Male 18.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 20.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 20.8
Samples: 4

Max nTPM: 22.0
Min nTPM: 19.7
Sample A Male 19.7
Sample B Male 22.0
Sample C Female 21.2
Sample D Female 20.2
Hippocampal formation
nTPM: 15.8
Samples: 4

Max nTPM: 19.2
Min nTPM: 14.0
Sample A Male 15.3
Sample B Male 14.0
Sample C Female 14.8
Sample D Female 19.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.6
69837243 Antisense, RP_050217_01_C10, Mouse strain C57BL/6J (56 days, male) 0.6
73769323 Antisense, RP_051121_04_B08, Mouse strain C57BL/6J (56 days, male) 0.5

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The Human Protein Atlas

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