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RPS27L
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BRAIN PONS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN PONS SPINAL CORD THALAMUS WHITE MATTER
Brain proteome
Pons
PONS - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:84.5 nTPM
HPA:84.5 nTPM
FANTOM5:167.0 Scaled Tags Per Million

PONS - Annotated protein expression
Pending normal tissue analysis

PONS - HPA Brain RNA-seq
Max nTPM 84.5
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 79.1
2301 Female, age 85, both hemispheres 81.6
2188 Female, age 91, both hemispheres 79.7
2090 Male, age 80, both hemispheres 79.6
1984 Male, age 76, both hemispheres 75.6
Dorsal cochlear nucleus
nTPM: 78.4
2187 Female, age 91, both hemispheres 79.6
2378 Male, age 80, both hemispheres 79.1
2802 Male, age 74, right hemisphere 78.8
2370 Male, age 61, both hemispheres 78.1
2058 Male, age 76, both hemispheres 76.6
Dorsal tegmental nucleus
nTPM: 80.7
1936 Male, age 76, left hemisphere 82.3
2326 Male, age 74, both hemispheres 81.2
2358 Male, age 61, both hemispheres 81.1
2083 Male, age 80, both hemispheres 78.3
Dorsolateral tegmental area
nTPM: 80.5
2360 Male, age 74, both hemispheres 82.0
2751 Female, age 85, both hemispheres 81.6
2654 Male, age 80, both hemispheres 80.9
2337 Male, age 61, both hemispheres 79.9
2141 Male, age 76, both hemispheres 78.2
Kolliker-Fuse nucleus
nTPM: 80.7
2315 Male, age 76, right hemisphere 85.9
2163 Male, age 80, both hemispheres 80.0
2793 Female, age 91, left hemisphere 76.1
Lateral lemniscal nuclei
nTPM: 77.3
2453 Male, age 74, right hemisphere 79.0
2746 Female, age 85, left hemisphere 77.9
2320 Female, age 91, left hemisphere 76.9
2036 Male, age 80, both hemispheres 76.8
2169 Male, age 76, both hemispheres 75.7
Lateral parabrachial nucleus
nTPM: 80.1
2792 Male, age 76, both hemispheres 84.6
2013 Male, age 80, both hemispheres 81.1
2790 Male, age 61, both hemispheres 78.8
2139 Female, age 85, right hemisphere 75.8
Lateral vestibular nucleus
nTPM: 79.3
2311 Male, age 80, both hemispheres 80.2
2184 Male, age 76, both hemispheres 78.3
Locus coeruleus
nTPM: 81.0
2788 Male, age 74, unknown 83.8
2014 Male, age 55, unknown 82.8
2123 Female, age 91, both hemispheres 81.3
2317 Female, age 72, unknown 80.7
2720 Male, age 74, both hemispheres 80.0
1980 Male, age 76, both hemispheres 79.5
2162 Male, age 80, both hemispheres 78.9
Medial olivary nucleus
nTPM: 84.5
1943 Male, age 61, both hemispheres 92.1
2138 Female, age 91, both hemispheres 82.9
1962 Male, age 76, both hemispheres 82.3
2851 Male, age 80, both hemispheres 80.6
Medial parabrachial nucleus
nTPM: 80.0
2156 Male, age 61, both hemispheres 82.1
2170 Female, age 91, both hemispheres 81.4
2854 Male, age 80, both hemispheres 80.7
2786 Male, age 76, both hemispheres 79.1
2463 Female, age 85, right hemisphere 76.6
Medial periolivary nuclei
nTPM: 78.3
2791 Male, age 74, right hemisphere 80.8
2081 Male, age 80, both hemispheres 79.3
2063 Male, age 76, both hemispheres 78.0
2171 Female, age 85, both hemispheres 77.6
2458 Female, age 91, both hemispheres 75.5
Motor facial nucleus
nTPM: 78.3
2365 Male, age 74, right hemisphere 81.1
2795 Female, age 91, both hemispheres 79.0
2126 Male, age 61, both hemispheres 78.8
2062 Male, age 76, both hemispheres 78.1
2327 Male, age 80, both hemispheres 77.1
2697 Female, age 85, both hemispheres 75.6
Motor trigeminal nucleus
nTPM: 76.9
2079 Male, age 80, both hemispheres 78.1
2309 Male, age 76, both hemispheres 78.0
2321 Female, age 91, both hemispheres 76.6
2560 Male, age 74, both hemispheres 76.5
2335 Male, age 61, both hemispheres 75.3
Nuclei of the trapezoid body
nTPM: 78.2
1983 Male, age 76, both hemispheres 80.2
2159 Male, age 61, both hemispheres 78.6
2368 Female, age 91, both hemispheres 77.5
2166 Male, age 80, both hemispheres 77.3
2735 Female, age 85, both hemispheres 77.2
Paramedian reticular nucleus
nTPM: 78.5
2313 Male, age 61, both hemispheres 79.5
2052 Male, age 76, both hemispheres 78.9
2050 Female, age 85, both hemispheres 78.8
2057 Male, age 80, both hemispheres 76.9
Pontine nuclei
nTPM: 78.6
2454 Male, age 74, left hemisphere 81.6
2727 Male, age 61, right hemisphere 80.7
2319 Female, age 91, both hemispheres 80.4
1863 Male, age 55, unknown 78.9
2109 Female, age 72, unknown 78.7
2115 Male, age 80, left hemisphere 78.3
1968 Male, age 76, left hemisphere 76.9
2787 Female, age 85, both hemispheres 73.7
Pontine raphe nucleus
nTPM: 78.5
2122 Female, age 85, midline 78.8
2853 Male, age 76, midline 78.2
Posteroventral cochlear nucleus
nTPM: 80.8
2341 Male, age 80, both hemispheres 84.6
2135 Female, age 91, both hemispheres 82.7
2371 Male, age 61, both hemispheres 81.2
2752 Female, age 85, both hemispheres 80.2
2070 Male, age 76, both hemispheres 75.6
Principal sensory trigeminal nucleus
nTPM: 77.9
2324 Male, age 76, both hemispheres 80.1
2008 Male, age 80, left hemisphere 79.0
2367 Female, age 91, left hemisphere 76.9
2158 Male, age 61, both hemispheres 75.4
Reticular pontine nucleus, caudal
nTPM: 77.3
2457 Female, age 91, both hemispheres 79.5
2092 Male, age 76, both hemispheres 78.2
2559 Male, age 74, both hemispheres 76.7
2332 Male, age 80, right hemisphere 74.7
Reticular pontine nucleus, oral
nTPM: 78.5
1939 Male, age 80, both hemispheres 80.3
2167 Male, age 76, both hemispheres 78.7
2366 Female, age 91, both hemispheres 78.6
2012 Female, age 85, both hemispheres 78.3
2361 Male, age 74, both hemispheres 76.6
Reticulotegmental nucleus
nTPM: 78.4
2322 Female, age 91, both hemispheres 79.5
2333 Male, age 80, both hemispheres 78.7
2325 Male, age 76, both hemispheres 77.7
2452 Male, age 74, both hemispheres 77.5
Spinal trigeminal nucleus, oral
nTPM: 77.8
2737 Female, age 85, both hemispheres 79.0
2164 Male, age 80, both hemispheres 77.9
1978 Male, age 76, both hemispheres 76.6
Subcoeruleus area
nTPM: 79.8
2369 Female, age 85, left hemisphere 81.2
1958 Male, age 80, both hemispheres 80.9
2451 Male, age 74, both hemispheres 80.8
2323 Female, age 91, left hemisphere 80.1
2089 Male, age 76, left hemisphere 76.0
Superior olive
nTPM: 78.4
2364 Male, age 74, right hemisphere 84.2
2020 Male, age 76, both hemispheres 79.8
1875 Female, age 85, both hemispheres 77.7
2329 Male, age 80, right hemisphere 75.8
2561 Female, age 91, both hemispheres 74.4
Superior vestibular nucleus
nTPM: 82.8
2383 Male, age 74, both hemispheres 87.4
2015 Male, age 80, both hemispheres 80.8
2061 Male, age 76, both hemispheres 80.1
Ventral periolivary nuclei
nTPM: 78.6
2023 Male, age 76, both hemispheres 81.2
2165 Male, age 80, both hemispheres 78.8
2794 Female, age 91, left hemisphere 77.2
2130 Female, age 85, both hemispheres 77.0
Ventrolateral tegmental area, A5 NE cell group
nTPM: 79.1
2359 Male, age 61, both hemispheres 81.2
2161 Male, age 80, both hemispheres 80.5
1959 Male, age 76, both hemispheres 80.1
2840 Female, age 85, both hemispheres 79.3
2456 Female, age 91, both hemispheres 76.9
2449 Male, age 74, both hemispheres 76.6

PONS - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 167.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 167.0
FF:10182-103D2 60 years, female 176.2
FF:10165-103B3 76 years, female 157.8
Pons
Scaled Tags Per Million: 82.1
FF:10033-101E6 18-54 years, mixed 82.1

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