HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:23.7 nTPM
HPA:23.7 nTPM
GTEx:19.6 nTPM
FANTOM5:44.4 Scaled Tags Per Million
Pig:14.5 nTPM
Mouse:104.9 nTPM
Allen mouse:12.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA001218
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 23.7
Sample id Sample description nTPM
Hippocampus
nTPM: 20.8
1898 Male, age 80, left hemisphere 24.4
2529 Female, age 94, left hemisphere 21.4
2148 Female, age 91, left hemisphere 20.5
1855 Male, age 76, left hemisphere 20.0
2621 Female, age 67, right hemisphere 20.0
1911 Female, age 85, right hemisphere 18.6
Dentate gyrus
nTPM: 21.4
1927 Female, age 91, both hemispheres 23.1
2010 Male, age 76, both hemispheres 22.1
2528 Male, age 74, both hemispheres 22.1
2531 Female, age 67, both hemispheres 20.9
2246 Female, age 85, both hemispheres 20.3
2530 Female, age 94, left hemisphere 20.0
Entorhinal gyrus
nTPM: 21.1
2764 Male, age 80, right hemisphere 23.7
1938 Female, age 85, left hemisphere 22.2
1787 Male, age 76, left hemisphere 21.3
2117 Female, age 91, right hemisphere 20.2
2613 Female, age 94, left hemisphere 19.8
2686 Male, age 75, right hemisphere 19.7
Hippocampus, CA1
nTPM: 22.1
2749 Male, age 80, left hemisphere 24.3
2527 Male, age 74, both hemispheres 22.8
1873 Female, age 85, both hemispheres 22.5
2045 Male, age 76, both hemispheres 20.9
2082 Female, age 91, right hemisphere 20.3
Hippocampus, CA2
nTPM: 22.4
1892 Male, age 76, both hemispheres 25.1
1963 Male, age 80, left hemisphere 24.3
2249 Male, age 74, both hemispheres 22.3
2113 Female, age 91, right hemisphere 21.6
1940 Female, age 85, left hemisphere 21.0
2437 Female, age 94, left hemisphere 20.4
Hippocampus, CA3
nTPM: 21.0
2436 Male, age 74, both hemispheres 22.4
1867 Male, age 76, both hemispheres 22.3
1891 Female, age 85, both hemispheres 21.8
2137 Male, age 80, left hemisphere 21.6
2620 Female, age 94, left hemisphere 20.0
2861 Female, age 67, both hemispheres 18.1
Parahippocampal cortex
nTPM: 21.4
1850 Male, age 80, both hemispheres 26.0
1990 Female, age 91, right hemisphere 22.9
1933 Female, age 85, both hemispheres 22.2
2693 Female, age 94, both hemispheres 21.6
2018 Male, age 76, both hemispheres 21.2
2245 Female, age 91, both hemispheres 20.7
2532 Female, age 72, left hemisphere 20.4
2692 Male, age 74, both hemispheres 20.3
2250 Female, age 67, right hemisphere 20.0
2622 Female, age 67, right hemisphere 19.0
Perirhinal gyrus
nTPM: 23.7
1847 Female, age 91, left hemisphere 25.4
1794 Male, age 80, right hemisphere 25.3
1841 Female, age 85, right hemisphere 23.9
2848 Male, age 76, right hemisphere 22.8
2521 Female, age 94, right hemisphere 21.3
Subiculum
nTPM: 21.0
1977 Female, age 85, both hemispheres 22.4
1901 Male, age 80, both hemispheres 21.7
2619 Male, age 74, both hemispheres 21.7
2438 Female, age 94, left hemisphere 21.0
2729 Female, age 91, right hemisphere 19.7
2042 Male, age 76, both hemispheres 19.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 19.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 19.6
Samples: 197

Max nTPM: 39.3
Min nTPM: 12.9
Std nTPM: 3.7
Median nTPM: 18.9
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 39.3
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 31.6
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 29.2
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 28.4
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 27.9
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 27.7
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 27.7
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 27.5
GTEX-TSE9-0011-R1A-SM-3DB7E 60-69 years, female 27.1
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 26.6
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 26.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 44.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 44.4
FF:10169-103B7 60 years, female 56.5
FF:10153-102I9 76 years, female 32.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 14.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 14.5
Samples: 4

Max nTPM: 15.3
Min nTPM: 13.6
Sample A Female 15.3
Sample B Female 14.9
Sample C Male 13.6
Sample D Male 14.0
Entorhinal cortex
nTPM: 13.7
Samples: 4

Max nTPM: 15.1
Min nTPM: 13.0
Sample A Female 13.5
Sample B Female 15.1
Sample C Male 13.3
Sample D Male 13.0
Subiculum
nTPM: 13.8
Samples: 4

Max nTPM: 14.2
Min nTPM: 13.3
Sample A Female 13.7
Sample B Female 14.2
Sample C Male 13.9
Sample D Male 13.3
Ventral hippocampus
nTPM: 14.3
Samples: 4

Max nTPM: 14.8
Min nTPM: 13.8
Sample A Female 14.8
Sample B Female 14.6
Sample C Male 13.9
Sample D Male 13.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 104.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 92.2
Samples: 4

Max nTPM: 97.8
Min nTPM: 85.7
Sample A Male 85.7
Sample B Male 97.8
Sample C Female 96.7
Sample D Female 88.6
Hippocampal formation
nTPM: 104.9
Samples: 4

Max nTPM: 123.8
Min nTPM: 95.9
Sample A Male 123.8
Sample B Male 97.3
Sample C Female 102.4
Sample D Female 95.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 12.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 12.6
68861649 Antisense, RP_050224_02_F09, Mouse strain C57BL/6J (56 days, male) 12.6

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