HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:187.9 nTPM
HPA:187.9 nTPM
GTEx:241.8 nTPM
FANTOM5:174.8 Scaled Tags Per Million
Pig:271.6 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA042360
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 187.9
Sample id Sample description nTPM
Hippocampus
nTPM: 171.3
1898 Male, age 80, left hemisphere 202.0
2621 Female, age 67, right hemisphere 190.4
2529 Female, age 94, left hemisphere 162.1
2148 Female, age 91, left hemisphere 162.0
1855 Male, age 76, left hemisphere 155.7
1911 Female, age 85, right hemisphere 155.3
Dentate gyrus
nTPM: 162.9
1927 Female, age 91, both hemispheres 175.7
2246 Female, age 85, both hemispheres 172.7
2530 Female, age 94, left hemisphere 168.4
2010 Male, age 76, both hemispheres 166.7
2531 Female, age 67, both hemispheres 156.2
2528 Male, age 74, both hemispheres 137.6
Entorhinal gyrus
nTPM: 169.5
1938 Female, age 85, left hemisphere 182.6
2613 Female, age 94, left hemisphere 182.0
2764 Male, age 80, right hemisphere 172.8
2686 Male, age 75, right hemisphere 163.6
1787 Male, age 76, left hemisphere 159.1
2117 Female, age 91, right hemisphere 156.8
Hippocampus, CA1
nTPM: 172.1
2749 Male, age 80, left hemisphere 208.1
1873 Female, age 85, both hemispheres 177.7
2527 Male, age 74, both hemispheres 168.9
2045 Male, age 76, both hemispheres 162.8
2082 Female, age 91, right hemisphere 143.1
Hippocampus, CA2
nTPM: 171.6
1892 Male, age 76, both hemispheres 201.3
1963 Male, age 80, left hemisphere 187.4
2249 Male, age 74, both hemispheres 177.3
1940 Female, age 85, left hemisphere 165.3
2437 Female, age 94, left hemisphere 152.2
2113 Female, age 91, right hemisphere 146.0
Hippocampus, CA3
nTPM: 168.8
1867 Male, age 76, both hemispheres 183.7
2137 Male, age 80, left hemisphere 182.2
1891 Female, age 85, both hemispheres 169.3
2436 Male, age 74, both hemispheres 168.8
2620 Female, age 94, left hemisphere 155.6
2861 Female, age 67, both hemispheres 153.4
Parahippocampal cortex
nTPM: 174.9
1850 Male, age 80, both hemispheres 201.9
2245 Female, age 91, both hemispheres 184.5
1933 Female, age 85, both hemispheres 184.4
2622 Female, age 67, right hemisphere 174.9
2250 Female, age 67, right hemisphere 174.2
1990 Female, age 91, right hemisphere 171.6
2532 Female, age 72, left hemisphere 170.5
2692 Male, age 74, both hemispheres 165.5
2693 Female, age 94, both hemispheres 161.0
2018 Male, age 76, both hemispheres 160.7
Perirhinal gyrus
nTPM: 187.9
1847 Female, age 91, left hemisphere 194.4
1794 Male, age 80, right hemisphere 192.2
1841 Female, age 85, right hemisphere 189.1
2521 Female, age 94, right hemisphere 187.3
2848 Male, age 76, right hemisphere 176.7
Subiculum
nTPM: 164.8
1901 Male, age 80, both hemispheres 181.3
1977 Female, age 85, both hemispheres 178.2
2619 Male, age 74, both hemispheres 170.4
2042 Male, age 76, both hemispheres 163.0
2438 Female, age 94, left hemisphere 156.8
2729 Female, age 91, right hemisphere 139.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 241.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 241.8
Samples: 197

Max nTPM: 601.8
Min nTPM: 137.5
Std nTPM: 48.4
Median nTPM: 234.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 601.8
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 392.2
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 362.5
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 341.5
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 338.5
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 335.7
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 335.2
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 332.1
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 328.9
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 317.7
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 307.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 174.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 174.8
FF:10169-103B7 60 years, female 197.7
FF:10153-102I9 76 years, female 151.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 271.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 270.5
Samples: 4

Max nTPM: 333.5
Min nTPM: 195.3
Sample A Female 333.5
Sample B Female 252.4
Sample C Male 300.6
Sample D Male 195.3
Entorhinal cortex
nTPM: 271.6
Samples: 4

Max nTPM: 330.9
Min nTPM: 219.9
Sample A Female 273.6
Sample B Female 330.9
Sample C Male 262.1
Sample D Male 219.9
Subiculum
nTPM: 268.7
Samples: 4

Max nTPM: 360.5
Min nTPM: 234.9
Sample A Female 360.5
Sample B Female 235.4
Sample C Male 234.9
Sample D Male 243.8
Ventral hippocampus
nTPM: 247.6
Samples: 4

Max nTPM: 278.3
Min nTPM: 209.1
Sample A Female 278.3
Sample B Female 209.1
Sample C Male 264.8
Sample D Male 238.0

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.