HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:204.1 nTPM
HPA:204.1 nTPM
GTEx:398.7 nTPM
FANTOM5:1239.6 Scaled Tags Per Million
Pig:419.4 nTPM
Mouse:1392.9 nTPM
Allen mouse:25.0 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 204.1
Sample id Sample description nTPM
Hippocampus
nTPM: 134.2
1898 Male, age 80, left hemisphere 191.6
1855 Male, age 76, left hemisphere 183.7
2621 Female, age 67, right hemisphere 181.3
2148 Female, age 91, left hemisphere 96.0
1911 Female, age 85, right hemisphere 77.6
2529 Female, age 94, left hemisphere 75.2
Dentate gyrus
nTPM: 141.0
2530 Female, age 94, left hemisphere 205.9
1927 Female, age 91, both hemispheres 177.4
2010 Male, age 76, both hemispheres 161.6
2246 Female, age 85, both hemispheres 129.9
2531 Female, age 67, both hemispheres 87.8
2528 Male, age 74, both hemispheres 83.7
Entorhinal gyrus
nTPM: 138.1
2613 Female, age 94, left hemisphere 185.3
2764 Male, age 80, right hemisphere 174.5
1787 Male, age 76, left hemisphere 169.4
1938 Female, age 85, left hemisphere 155.2
2117 Female, age 91, right hemisphere 85.7
2686 Male, age 75, right hemisphere 58.7
Hippocampus, CA1
nTPM: 173.2
2749 Male, age 80, left hemisphere 353.6
1873 Female, age 85, both hemispheres 153.1
2045 Male, age 76, both hemispheres 143.5
2527 Male, age 74, both hemispheres 118.7
2082 Female, age 91, right hemisphere 97.3
Hippocampus, CA2
nTPM: 128.7
1892 Male, age 76, both hemispheres 211.9
1963 Male, age 80, left hemisphere 161.4
1940 Female, age 85, left hemisphere 113.2
2437 Female, age 94, left hemisphere 111.9
2249 Male, age 74, both hemispheres 88.9
2113 Female, age 91, right hemisphere 85.1
Hippocampus, CA3
nTPM: 138.4
2137 Male, age 80, left hemisphere 229.1
2620 Female, age 94, left hemisphere 163.7
1867 Male, age 76, both hemispheres 137.0
2436 Male, age 74, both hemispheres 121.9
2861 Female, age 67, both hemispheres 116.3
1891 Female, age 85, both hemispheres 62.1
Parahippocampal cortex
nTPM: 137.6
2245 Female, age 91, both hemispheres 205.7
1850 Male, age 80, both hemispheres 172.2
2250 Female, age 67, right hemisphere 164.6
2532 Female, age 72, left hemisphere 159.8
1990 Female, age 91, right hemisphere 140.3
1933 Female, age 85, both hemispheres 132.1
2018 Male, age 76, both hemispheres 126.4
2693 Female, age 94, both hemispheres 107.4
2622 Female, age 67, right hemisphere 96.5
2692 Male, age 74, both hemispheres 71.0
Perirhinal gyrus
nTPM: 204.1
1794 Male, age 80, right hemisphere 257.8
1847 Female, age 91, left hemisphere 242.2
2521 Female, age 94, right hemisphere 205.1
1841 Female, age 85, right hemisphere 170.8
2848 Male, age 76, right hemisphere 144.8
Subiculum
nTPM: 103.1
1977 Female, age 85, both hemispheres 141.1
1901 Male, age 80, both hemispheres 132.1
2619 Male, age 74, both hemispheres 126.9
2438 Female, age 94, left hemisphere 100.8
2042 Male, age 76, both hemispheres 82.6
2729 Female, age 91, right hemisphere 34.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 398.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 398.7
Samples: 197

Max nTPM: 979.9
Min nTPM: 93.0
Std nTPM: 179.2
Median nTPM: 375.4
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 979.9
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 925.3
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 877.9
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 870.3
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 852.9
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 833.9
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 826.6
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 780.2
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 756.9
GTEX-1B8SF-0011-R1b-SM-7P8Q8 60-69 years, male 756.2
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 744.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 1239.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 1239.6
FF:10169-103B7 60 years, female 1601.9
FF:10153-102I9 76 years, female 877.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 419.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 407.7
Samples: 4

Max nTPM: 551.1
Min nTPM: 301.0
Sample A Female 551.1
Sample B Female 407.1
Sample C Male 371.4
Sample D Male 301.0
Entorhinal cortex
nTPM: 387.7
Samples: 4

Max nTPM: 440.1
Min nTPM: 331.7
Sample A Female 440.1
Sample B Female 331.7
Sample C Male 404.9
Sample D Male 374.0
Subiculum
nTPM: 377.4
Samples: 4

Max nTPM: 494.0
Min nTPM: 310.1
Sample A Female 494.0
Sample B Female 310.1
Sample C Male 383.2
Sample D Male 322.1
Ventral hippocampus
nTPM: 419.4
Samples: 4

Max nTPM: 573.1
Min nTPM: 245.7
Sample A Female 431.8
Sample B Female 245.7
Sample C Male 573.1
Sample D Male 426.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 1392.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 1392.9
Samples: 4

Max nTPM: 1655.1
Min nTPM: 1253.2
Sample A Male 1253.2
Sample B Male 1396.4
Sample C Female 1266.9
Sample D Female 1655.1
Hippocampal formation
nTPM: 1324.8
Samples: 4

Max nTPM: 1397.2
Min nTPM: 1279.3
Sample A Male 1279.3
Sample B Male 1314.3
Sample C Female 1308.2
Sample D Female 1397.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 25.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 25.0
69526976 Antisense, RP_050421_02_A08, Mouse strain C57BL/6J (56 days, male) 25.7
74881559 Antisense, RP_060315_04_C11, Mouse strain C57BL/6J (56 days, male) 24.3

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