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BRAIN THALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Thalamus
THALAMUS - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:317.5 nTPM
HPA:317.5 nTPM
FANTOM5:163.5 Scaled Tags Per Million

THALAMUS - HPA Brain RNA-seq
Max nTPM 317.5
Sample id Sample description nTPM
Anterior thalamic nucleus, ventral
nTPM: 300.9
2396 Male, age 61, right hemisphere 324.7
2497 Male, age 66, unknown 293.6
2032 Female, age 42, unknown 284.4
Centromedial thalamic nucleus
nTPM: 287.8
2279 Female, age 85, left hemisphere 293.4
2401 Male, age 76, right hemisphere 282.2
Habenula
nTPM: 287.2
2276 Male, age 66, unknown 302.3
2252 Male, age 62, unknown 286.3
1957 Male, age 80, both hemispheres 284.4
2203 Male, age 61, left hemisphere 275.9
Lateral geniculate body
nTPM: 290.0
2575 Female, age 94, right hemisphere 311.2
2857 Male, age 74, right hemisphere 306.3
2659 Male, age 66, unknown 291.6
2841 Male, age 80, both hemispheres 290.7
2035 Female, age 72, unknown 286.5
1953 Male, age 62, unknown 285.8
2106 Female, age 67, right hemisphere 278.6
2399 Male, age 61, left hemisphere 268.9
Lateral thalamic nuclei
nTPM: 289.3
2573 Female, age 94, left hemisphere 304.5
2661 Female, age 72, unknown 299.7
2577 Male, age 74, both hemispheres 291.3
1903 Male, age 76, left hemisphere 277.7
2765 Female, age 67, both hemispheres 273.3
Medial dorsal thalamic nucleus
nTPM: 296.3
2572 Female, age 94, right hemisphere 370.0
1930 Female, age 42, unknown 310.8
1810 Male, age 48, unknown 303.6
2576 Male, age 74, both hemispheres 300.7
1971 Male, age 61, right hemisphere 294.5
2402 Female, age 67, both hemispheres 294.2
2498 Male, age 66, unknown 287.0
2492 Male, age 75, right hemisphere 285.6
2026 Male, age 62, unknown 285.0
2660 Female, age 72, unknown 284.8
2283 Male, age 80, right hemisphere 282.7
1859 Male, age 76, both hemispheres 279.0
2039 Female, age 72, unknown 274.1
Medial geniculate body
nTPM: 290.3
2650 Female, age 94, left hemisphere 316.2
2207 Male, age 80, right hemisphere 299.3
2657 Male, age 74, right hemisphere 299.3
2049 Male, age 76, both hemispheres 292.1
2217 Female, age 72, unknown 283.1
1811 Female, age 42, unknown 276.7
2571 Male, age 75, right hemisphere 265.4
Nucleus reuniens
nTPM: 287.8
2210 Female, age 85, left hemisphere 299.1
2205 Male, age 80, left hemisphere 288.6
2212 Female, age 67, left hemisphere 275.7
Nucleus rhomboideus
nTPM: 302.6
2213 Female, age 67, left hemisphere 317.9
2280 Female, age 85, left hemisphere 307.4
2206 Male, age 80, both hemispheres 282.5
Posterior thalamic nucleus
nTPM: 317.5
2649 Female, age 94, both hemispheres 387.1
2495 Female, age 67, right hemisphere 304.1
2655 Male, age 74, right hemisphere 295.1
2266 Male, age 76, right hemisphere 283.8
Pulvinar
nTPM: 286.9
1932 Male, age 80, right hemisphere 294.9
2582 Female, age 72, unknown 293.1
2496 Female, age 67, right hemisphere 291.3
2499 Male, age 66, unknown 290.4
2214 Male, age 76, right hemisphere 288.7
2724 Male, age 74, right hemisphere 288.4
1899 Female, age 42, unknown 287.1
1972 Male, age 62, unknown 283.0
1929 Male, age 48, unknown 277.9
2398 Male, age 61, left hemisphere 274.2
Subthalamic nucleus
nTPM: 285.9
2658 Male, age 74, both hemispheres 319.0
2282 Male, age 61, both hemispheres 294.8
2056 Female, age 72, unknown 285.5
2124 Male, age 62, unknown 281.1
2216 Male, age 48, unknown 280.7
2275 Male, age 66, unknown 279.4
2406 Female, age 72, unknown 274.2
2779 Female, age 42, unknown 272.8
Ventral posterolateral thalamic nucleus
nTPM: 288.5
2397 Male, age 61, right hemisphere 301.4
2581 Female, age 72, unknown 292.8
2578 Male, age 74, both hemispheres 290.3
2570 Male, age 75, right hemisphere 289.6
2197 Male, age 80, both hemispheres 280.1
2740 Male, age 76, right hemisphere 277.1
Ventral posteromedial thalamic nucleus
nTPM: 288.7
2202 Male, age 61, left hemisphere 304.8
2653 Male, age 74, both hemispheres 301.7
2758 Male, age 80, both hemispheres 282.4
2127 Male, age 76, right hemisphere 279.8
2281 Male, age 75, right hemisphere 274.7
Ventral thalamic nuclei
nTPM: 287.5
1845 Male, age 48, unknown 292.3
2858 Female, age 72, unknown 292.3
2204 Male, age 80, both hemispheres 291.7
1912 Female, age 42, unknown 291.3
2580 Male, age 66, unknown 290.3
2291 Female, age 72, unknown 289.6
1860 Male, age 76, both hemispheres 282.8
2285 Male, age 62, unknown 279.3
2652 Male, age 74, left hemisphere 278.2
Ventromedial nucleus
nTPM: 265.8
1822 Female, age 42, unknown 268.8
1982 Female, age 72, unknown 262.8
Zona incerta
nTPM: 292.5
2822 Male, age 74, right hemisphere 314.4
2208 Male, age 80, right hemisphere 296.2
2403 Male, age 62, unknown 289.5
2215 Male, age 66, unknown 286.5
2663 Female, age 72, unknown 275.7

THALAMUS - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 163.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Thalamus
Scaled Tags Per Million: 163.5
FF:10154-103A1 76 years, female 163.5

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