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RPS23
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BRAIN SPINAL CORD Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA MIDBRAIN
OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
SPINAL CORD - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:1171.9 nTPM
HPA:1171.9 nTPM
GTEx:1310.0 nTPM
FANTOM5:452.9 Scaled Tags Per Million
Pig:0.0 nTPM

SPINAL CORD - HPA Brain RNA-seq
Max nTPM 1171.9
Sample id Sample description nTPM
Cervical spinal cord, central gray
nTPM: 1103.9
2565 Male, age 75, midline 1168.7
1981 Female, age 72, midline 1122.8
2194 Female, age 79, both hemispheres 1084.6
2816 Male, age 47, midline 1075.1
2048 Male, age 55, midline 1068.3
Cervical spinal cord, dorsal horn
nTPM: 1113.1
2173 Female, age 72, unknown 1167.5
2296 Male, age 66, both hemispheres 1152.9
2069 Male, age 47, both hemispheres 1152.2
1877 Male, age 55, unknown 1102.9
2297 Male, age 75, both hemispheres 1052.7
2721 Male, age 90, both hemispheres 1050.5
Cervical spinal cord, ventral horn
nTPM: 1171.9
2480 Male, age 75, both hemispheres 1265.3
2809 Male, age 90, both hemispheres 1238.1
2098 Female, age 72, unknown 1172.5
2068 Male, age 55, unknown 1168.5
2295 Male, age 66, both hemispheres 1130.5
2820 Female, age 79, both hemispheres 1056.4

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 1310.0
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 1310.0
Samples: 159

Max nTPM: 2425.7
Min nTPM: 459.8
Std nTPM: 396.3
Median nTPM: 1231.7
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 2425.7
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 2362.5
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 2337.4
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 2154.9
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 2145.6
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 2100.0
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 2094.3
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 2053.1
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 2042.3
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 1990.9
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 1976.4
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 1974.7
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 1969.9
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 1943.8
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 1931.5
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 1930.1
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 1923.3
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 1918.4
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 1904.5
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 1873.8
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 1848.0
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 1841.9
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 1808.8
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 1791.4
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 1789.4
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 1760.9
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 1748.1
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 1714.8
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 1690.3
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 1690.1
GTEX-QVUS-0011-R9A-SM-3GIJA 60-69 years, female 1669.1
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 1636.1
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 1631.6
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 1624.0
GTEX-RU72-0011-R9A-SM-2TF67 50-59 years, female 1623.1
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 1620.3
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 1561.0
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 1540.2
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 1532.0
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 1528.8
GTEX-NPJ7-0011-R9a-SM-2TC5R 60-69 years, female 1516.8
GTEX-NPJ8-0011-R9a-SM-2YUN5 40-49 years, male 1516.5
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 1516.4
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 1498.8
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 1486.7
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 1480.9
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 1475.7
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 1467.8
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 1467.6
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 1466.7
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 1436.2
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 1427.1
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 1406.7
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 1400.4
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 1396.5
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 1392.8
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 1383.1
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 1376.4
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 1367.8
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 1367.6
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 1363.4
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 1355.6
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 1350.1
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 1339.9
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 1337.7
GTEX-1J1OQ-0011-R9b-SM-ARZMK 40-49 years, female 1334.7
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 1326.8
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 1318.1
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 1318.1
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 1315.5
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 1314.5
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 1310.4
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 1299.7
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 1292.2
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 1278.1
GTEX-Q2AG-0011-R9A-SM-2HMJ6 40-49 years, female 1266.7
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 1259.9
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 1257.6
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 1243.6
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 1231.7
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 1229.5
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 1224.3
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 1219.3
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 1213.3
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 1209.6
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 1198.4
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 1188.3
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 1177.6
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 1176.1
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 1164.7
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 1164.1
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 1162.0
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 1157.8
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 1150.1
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 1148.8
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 1144.7
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 1144.6
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 1136.2
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 1135.5
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 1131.4
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 1130.8
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 1119.9
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 1117.7
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 1111.5
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 1110.5
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 1108.7
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 1097.8
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 1089.3
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 1089.1
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 1088.9
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 1079.1
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 1077.3
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 1075.8
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 1075.6
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 1053.2
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 1045.9
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 1045.5
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 1036.6
GTEX-18464-0011-R9a-SM-731BK 50-59 years, male 1023.8
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 1015.4
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 1014.4
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 1004.3
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 999.5
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 996.5
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 992.6
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 991.5
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 988.5
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 985.2
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 976.3
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 962.2
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 961.1
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 960.9
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 956.5
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 953.4
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 944.3
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 940.1
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 934.3
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 928.4
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 889.1
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 883.2
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 871.4
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 866.0
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 846.6
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 843.4
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 840.4
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 830.1
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 810.5
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 805.6
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 799.6
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 794.8
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 791.3
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 776.6
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 771.7
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 691.1
GTEX-R55E-0011-R9A-SM-2TC6C 20-29 years, male 679.9
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 659.2
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 619.4
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 541.4
GTEX-RNOR-0011-R9A-SM-2TF52 50-59 years, female 459.8
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SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 452.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 452.9
FF:10159-103A6 76 years, female 458.6
FF:10181-103D1 60 years, female 447.1

SPINAL CORD - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 0.0
Pig sample Sample description nTPM
Dorsal spinal cord
nTPM: 0.0
Samples: 4

Max nTPM: 0.0
Min nTPM: 0.0
Sample A Female 0.0
Sample B Female 0.0
Sample C Male 0.0
Sample D Male 0.0
Ventral spinal cord
nTPM: 0.0
Samples: 4

Max nTPM: 0.0
Min nTPM: 0.0
Sample A Female 0.0
Sample B Female 0.0
Sample C Male 0.0
Sample D Male 0.0

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