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AL162231.1
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  • AL162231.1
BRAIN MEDULLA OBLONGATA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Medulla oblongata
MEDULLA OBLONGATA - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:48.4 nTPM
HPA:48.4 nTPM
FANTOM5:6.3 Scaled Tags Per Million

MEDULLA OBLONGATA - HPA Brain RNA-seq
Max nTPM 48.4
Sample id Sample description nTPM
Area postrema
nTPM: 47.4
2799 Male, age 61, both hemispheres 52.9
2054 Male, age 76, both hemispheres 44.8
2306 Male, age 80, both hemispheres 44.5
Cuneate nuclei
nTPM: 45.7
2376 Male, age 61, both hemispheres 46.2
2131 Male, age 76, both hemispheres 46.1
2381 Male, age 80, both hemispheres 44.7
Dorsal medullary reticular nucleus
nTPM: 47.4
2040 Female, age 85, both hemispheres 48.0
2373 Male, age 61, both hemispheres 47.9
2088 Male, age 76, both hemispheres 46.3
Dorsal motor vagal complex
nTPM: 47.4
2133 Female, age 91, both hemispheres 50.6
2000 Male, age 74, unknown 49.8
2797 Male, age 61, both hemispheres 49.6
2643 Male, age 74, both hemispheres 47.5
2844 Male, age 55, unknown 46.5
2807 Female, age 85, both hemispheres 45.7
2813 Female, age 72, unknown 45.5
2185 Male, age 76, both hemispheres 44.2
Gigantocellular reticular nuclei, medullary
nTPM: 45.8
1876 Female, age 85, both hemispheres 47.5
2314 Male, age 61, both hemispheres 46.9
2022 Male, age 76, right hemisphere 46.0
2462 Male, age 74, both hemispheres 45.6
2387 Female, age 91, both hemispheres 45.4
2310 Male, age 80, both hemispheres 43.6
Gigantocellular reticular nuclei, pars
nTPM: 46.0
2084 Female, age 85, both hemispheres 49.3
2168 Male, age 76, both hemispheres 47.7
2706 Male, age 80, both hemispheres 44.8
2336 Male, age 61, both hemispheres 44.3
2330 Male, age 80, both hemispheres 43.9
Inferior olive
nTPM: 46.0
2563 Male, age 74, both hemispheres 47.3
2085 Female, age 85, both hemispheres 47.1
2628 Female, age 91, both hemispheres 46.8
2178 Male, age 61, both hemispheres 45.9
2379 Male, age 80, both hemispheres 42.7
Lateral medullary reticular nucleus
nTPM: 46.0
2044 Male, age 76, both hemispheres 48.2
2374 Male, age 61, both hemispheres 47.2
2804 Female, age 91, both hemispheres 46.6
2305 Male, age 74, both hemispheres 45.7
2852 Male, age 80, both hemispheres 44.8
2190 Female, age 85, both hemispheres 43.6
Medial vestibular nucleus
nTPM: 48.0
2803 Female, age 91, both hemispheres 50.0
2743 Female, age 85, both hemispheres 48.9
2624 Male, age 61, both hemispheres 48.3
2093 Male, age 80, both hemispheres 47.5
2134 Male, age 76, both hemispheres 46.9
2801 Male, age 74, both hemispheres 46.4
Motor hypoglossal nucleus
nTPM: 45.9
2125 Female, age 91, both hemispheres 47.2
2132 Female, age 85, both hemispheres 47.0
2182 Male, age 80, both hemispheres 46.6
2277 Male, age 76, both hemispheres 45.6
2461 Male, age 61, both hemispheres 43.4
Nucleus ambiguus
nTPM: 48.4
2096 Female, age 85, both hemispheres 53.5
2071 Male, age 76, both hemispheres 43.2
Nucleus cuneatus
nTPM: 46.0
2562 Male, age 61, both hemispheres 49.3
2564 Male, age 74, both hemispheres 49.0
2805 Female, age 91, both hemispheres 45.1
2808 Female, age 85, both hemispheres 45.1
2100 Male, age 76, both hemispheres 44.8
2380 Male, age 80, both hemispheres 42.9
Nucleus gracilis
nTPM: 43.0
2627 Male, age 74, both hemispheres 45.7
2299 Female, age 85, both hemispheres 41.8
2382 Male, age 80, both hemispheres 41.4
Nucleus raphe magnus
nTPM: 46.6
2160 Male, age 61, both hemispheres 48.2
2328 Male, age 80, both hemispheres 48.1
2051 Male, age 76, both hemispheres 47.0
2172 Female, age 85, both hemispheres 46.6
2455 Male, age 74, both hemispheres 45.1
2459 Female, age 91, both hemispheres 44.5
Nucleus raphe obscurus
nTPM: 45.6
2800 Male, age 61, midline 48.3
2845 Female, age 85, midline 45.6
2142 Male, age 76, midline 42.8
Nucleus raphe pallidus
nTPM: 45.3
1924 Male, age 61, midline 47.5
2183 Male, age 80, midline 45.4
2145 Male, age 76, midline 43.1
Nucleus tractus solitarii
nTPM: 45.3
2656 Male, age 76, both hemispheres 47.7
2307 Male, age 80, both hemispheres 46.1
2144 Female, age 91, right hemisphere 44.2
2191 Female, age 85, both hemispheres 43.2
Parvicellular reticular nuclei
nTPM: 45.4
2095 Male, age 76, both hemispheres 46.8
2119 Male, age 80, both hemispheres 45.7
2558 Male, age 74, both hemispheres 43.7
Parvicellular reticular nuclei, medullary
nTPM: 46.5
2091 Female, age 85, both hemispheres 47.0
2189 Female, age 91, both hemispheres 46.5
2181 Male, age 80, left hemisphere 46.0
Peritrigeminal nucleus
nTPM: 46.4
2179 Male, age 61, both hemispheres 47.7
2067 Female, age 85, both hemispheres 46.9
2136 Male, age 76, both hemispheres 44.6
Prepositus hypoglossal nucleus
nTPM: 47.3
2855 Female, age 85, right hemisphere 48.6
2086 Male, age 80, both hemispheres 46.0
Spinal trigeminal nucleus, caudal
nTPM: 46.8
2390 Female, age 91, both hemispheres 49.3
2642 Male, age 74, both hemispheres 47.5
2312 Male, age 61, both hemispheres 46.1
2447 Male, age 76, both hemispheres 46.0
2308 Male, age 80, both hemispheres 45.3
Spinal trigeminal nucleus, interpolar
nTPM: 48.1
2066 Male, age 76, right hemisphere 49.8
2625 Male, age 61, both hemispheres 48.6
2389 Female, age 91, both hemispheres 48.4
2386 Female, age 85, both hemispheres 47.1
2033 Male, age 80, both hemispheres 46.4
Spinal vestibular nucleus
nTPM: 47.1
2806 Female, age 85, both hemispheres 48.3
2186 Female, age 91, both hemispheres 48.1
2780 Male, age 80, both hemispheres 47.7
2796 Male, age 61, both hemispheres 47.4
2748 Male, age 76, both hemispheres 45.8
2384 Male, age 74, both hemispheres 45.3
Ventral medullary reticular nucleus
nTPM: 47.5
2372 Male, age 61, both hemispheres 48.6
2060 Male, age 76, both hemispheres 46.3
Ventrolateral medulla, A1-C1 cell groups
nTPM: 46.3
2741 Female, age 85, both hemispheres 48.4
1986 Male, age 76, both hemispheres 47.2
2180 Male, age 61, both hemispheres 46.7
2302 Female, age 91, both hemispheres 45.3
2118 Male, age 80, both hemispheres 44.0

MEDULLA OBLONGATA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

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Max Scaled Tags Per Million 6.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Medulla oblongata
Scaled Tags Per Million: 6.3
FF:10155-103A2 76 years, female 10.0
FF:10174-103C3 60 years, female 5.0
FF:10038-101F2 18-64 years, mixed 3.9

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