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BRAIN MEDULLA OBLONGATA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Medulla oblongata
MEDULLA OBLONGATA - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:952.9 nTPM
HPA:952.9 nTPM
FANTOM5:38.1 Scaled Tags Per Million

MEDULLA OBLONGATA - HPA Brain RNA-seq
Max nTPM 952.9
Sample id Sample description nTPM
Area postrema
nTPM: 909.2
2306 Male, age 80, both hemispheres 1110.5
2799 Male, age 61, both hemispheres 848.8
2054 Male, age 76, both hemispheres 768.3
Cuneate nuclei
nTPM: 800.9
2381 Male, age 80, both hemispheres 859.3
2376 Male, age 61, both hemispheres 793.3
2131 Male, age 76, both hemispheres 750.2
Dorsal medullary reticular nucleus
nTPM: 794.5
2373 Male, age 61, both hemispheres 839.2
2040 Female, age 85, both hemispheres 779.2
2088 Male, age 76, both hemispheres 765.0
Dorsal motor vagal complex
nTPM: 830.8
2185 Male, age 76, both hemispheres 906.3
2797 Male, age 61, both hemispheres 898.9
2813 Female, age 72, unknown 865.3
2807 Female, age 85, both hemispheres 857.7
2133 Female, age 91, both hemispheres 802.2
2643 Male, age 74, both hemispheres 795.5
2000 Male, age 74, unknown 789.6
2844 Male, age 55, unknown 730.6
Gigantocellular reticular nuclei, medullary
nTPM: 849.1
2314 Male, age 61, both hemispheres 1012.7
2310 Male, age 80, both hemispheres 886.8
2387 Female, age 91, both hemispheres 844.8
2022 Male, age 76, right hemisphere 831.1
1876 Female, age 85, both hemispheres 789.9
2462 Male, age 74, both hemispheres 729.1
Gigantocellular reticular nuclei, pars
nTPM: 851.2
2330 Male, age 80, both hemispheres 965.4
2336 Male, age 61, both hemispheres 918.5
2706 Male, age 80, both hemispheres 844.0
2084 Female, age 85, both hemispheres 794.2
2168 Male, age 76, both hemispheres 733.9
Inferior olive
nTPM: 884.1
2628 Female, age 91, both hemispheres 990.3
2085 Female, age 85, both hemispheres 905.7
2178 Male, age 61, both hemispheres 903.4
2379 Male, age 80, both hemispheres 839.0
2563 Male, age 74, both hemispheres 782.0
Lateral medullary reticular nucleus
nTPM: 885.4
2374 Male, age 61, both hemispheres 1043.7
2190 Female, age 85, both hemispheres 878.2
2852 Male, age 80, both hemispheres 874.1
2804 Female, age 91, both hemispheres 863.9
2305 Male, age 74, both hemispheres 857.3
2044 Male, age 76, both hemispheres 795.2
Medial vestibular nucleus
nTPM: 835.2
2624 Male, age 61, both hemispheres 937.4
2803 Female, age 91, both hemispheres 912.9
2801 Male, age 74, both hemispheres 868.7
2093 Male, age 80, both hemispheres 812.0
2743 Female, age 85, both hemispheres 749.2
2134 Male, age 76, both hemispheres 730.8
Motor hypoglossal nucleus
nTPM: 852.1
2461 Male, age 61, both hemispheres 932.3
2182 Male, age 80, both hemispheres 879.6
2132 Female, age 85, both hemispheres 878.5
2125 Female, age 91, both hemispheres 845.6
2277 Male, age 76, both hemispheres 724.3
Nucleus ambiguus
nTPM: 836.0
2071 Male, age 76, both hemispheres 912.1
2096 Female, age 85, both hemispheres 759.9
Nucleus cuneatus
nTPM: 835.1
2808 Female, age 85, both hemispheres 941.0
2805 Female, age 91, both hemispheres 874.4
2380 Male, age 80, both hemispheres 856.8
2100 Male, age 76, both hemispheres 786.8
2564 Male, age 74, both hemispheres 783.9
2562 Male, age 61, both hemispheres 767.9
Nucleus gracilis
nTPM: 952.9
2299 Female, age 85, both hemispheres 1007.0
2382 Male, age 80, both hemispheres 987.7
2627 Male, age 74, both hemispheres 863.9
Nucleus raphe magnus
nTPM: 803.5
2328 Male, age 80, both hemispheres 870.1
2459 Female, age 91, both hemispheres 853.3
2051 Male, age 76, both hemispheres 827.0
2455 Male, age 74, both hemispheres 814.3
2172 Female, age 85, both hemispheres 746.3
2160 Male, age 61, both hemispheres 710.0
Nucleus raphe obscurus
nTPM: 905.0
2845 Female, age 85, midline 941.4
2142 Male, age 76, midline 917.2
2800 Male, age 61, midline 856.3
Nucleus raphe pallidus
nTPM: 866.3
2145 Male, age 76, midline 909.4
1924 Male, age 61, midline 848.2
2183 Male, age 80, midline 841.2
Nucleus tractus solitarii
nTPM: 747.7
2191 Female, age 85, both hemispheres 810.9
2307 Male, age 80, both hemispheres 773.4
2144 Female, age 91, right hemisphere 704.9
2656 Male, age 76, both hemispheres 701.4
Parvicellular reticular nuclei
nTPM: 808.5
2095 Male, age 76, both hemispheres 842.1
2119 Male, age 80, both hemispheres 832.4
2558 Male, age 74, both hemispheres 751.0
Parvicellular reticular nuclei, medullary
nTPM: 820.8
2189 Female, age 91, both hemispheres 841.9
2181 Male, age 80, left hemisphere 826.7
2091 Female, age 85, both hemispheres 793.9
Peritrigeminal nucleus
nTPM: 834.9
2067 Female, age 85, both hemispheres 851.6
2136 Male, age 76, both hemispheres 838.4
2179 Male, age 61, both hemispheres 814.6
Prepositus hypoglossal nucleus
nTPM: 798.0
2855 Female, age 85, right hemisphere 823.7
2086 Male, age 80, both hemispheres 772.4
Spinal trigeminal nucleus, caudal
nTPM: 853.9
2312 Male, age 61, both hemispheres 898.5
2308 Male, age 80, both hemispheres 887.6
2390 Female, age 91, both hemispheres 865.9
2642 Male, age 74, both hemispheres 821.8
2447 Male, age 76, both hemispheres 795.7
Spinal trigeminal nucleus, interpolar
nTPM: 807.5
2389 Female, age 91, both hemispheres 859.7
2625 Male, age 61, both hemispheres 841.4
2033 Male, age 80, both hemispheres 786.7
2386 Female, age 85, both hemispheres 784.3
2066 Male, age 76, right hemisphere 765.3
Spinal vestibular nucleus
nTPM: 859.7
2796 Male, age 61, both hemispheres 952.6
2806 Female, age 85, both hemispheres 881.5
2748 Male, age 76, both hemispheres 860.2
2186 Female, age 91, both hemispheres 843.0
2780 Male, age 80, both hemispheres 810.9
2384 Male, age 74, both hemispheres 810.1
Ventral medullary reticular nucleus
nTPM: 826.0
2372 Male, age 61, both hemispheres 841.1
2060 Male, age 76, both hemispheres 811.0
Ventrolateral medulla, A1-C1 cell groups
nTPM: 868.4
2180 Male, age 61, both hemispheres 906.9
2118 Male, age 80, both hemispheres 900.7
2302 Female, age 91, both hemispheres 890.5
2741 Female, age 85, both hemispheres 822.0
1986 Male, age 76, both hemispheres 821.8

MEDULLA OBLONGATA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 38.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Medulla oblongata
Scaled Tags Per Million: 38.1
FF:10155-103A2 76 years, female 43.3
FF:10038-101F2 18-64 years, mixed 36.9
FF:10174-103C3 60 years, female 34.0

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