HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:18.6 nTPM
HPA:18.6 nTPM
GTEx:20.4 nTPM
FANTOM5:14.0 Scaled Tags Per Million
Pig:5.8 nTPM
Mouse:5.9 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA048928
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 18.6
Sample id Sample description nTPM
Hippocampus
nTPM: 17.0
2529 Female, age 94, left hemisphere 18.6
2148 Female, age 91, left hemisphere 17.6
2621 Female, age 67, right hemisphere 17.4
1911 Female, age 85, right hemisphere 16.6
1898 Male, age 80, left hemisphere 16.3
1855 Male, age 76, left hemisphere 15.4
Dentate gyrus
nTPM: 16.2
2528 Male, age 74, both hemispheres 18.0
2010 Male, age 76, both hemispheres 17.5
2530 Female, age 94, left hemisphere 16.0
1927 Female, age 91, both hemispheres 15.4
2531 Female, age 67, both hemispheres 15.2
2246 Female, age 85, both hemispheres 15.0
Entorhinal gyrus
nTPM: 17.4
2117 Female, age 91, right hemisphere 23.5
2764 Male, age 80, right hemisphere 18.1
2613 Female, age 94, left hemisphere 16.2
2686 Male, age 75, right hemisphere 16.2
1787 Male, age 76, left hemisphere 15.2
1938 Female, age 85, left hemisphere 15.1
Hippocampus, CA1
nTPM: 15.8
2527 Male, age 74, both hemispheres 18.1
2082 Female, age 91, right hemisphere 17.3
1873 Female, age 85, both hemispheres 14.8
2749 Male, age 80, left hemisphere 14.5
2045 Male, age 76, both hemispheres 14.1
Hippocampus, CA2
nTPM: 17.0
1963 Male, age 80, left hemisphere 18.7
2249 Male, age 74, both hemispheres 18.1
2113 Female, age 91, right hemisphere 17.6
2437 Female, age 94, left hemisphere 17.0
1940 Female, age 85, left hemisphere 16.6
1892 Male, age 76, both hemispheres 13.9
Hippocampus, CA3
nTPM: 15.8
1891 Female, age 85, both hemispheres 17.4
1867 Male, age 76, both hemispheres 16.6
2861 Female, age 67, both hemispheres 16.5
2436 Male, age 74, both hemispheres 16.0
2620 Female, age 94, left hemisphere 14.2
2137 Male, age 80, left hemisphere 13.9
Parahippocampal cortex
nTPM: 16.2
1990 Female, age 91, right hemisphere 18.4
2692 Male, age 74, both hemispheres 17.9
2018 Male, age 76, both hemispheres 17.4
2250 Female, age 67, right hemisphere 16.6
2245 Female, age 91, both hemispheres 15.4
2532 Female, age 72, left hemisphere 15.4
2693 Female, age 94, both hemispheres 15.4
1933 Female, age 85, both hemispheres 15.2
2622 Female, age 67, right hemisphere 15.2
1850 Male, age 80, both hemispheres 14.9
Perirhinal gyrus
nTPM: 14.4
2521 Female, age 94, right hemisphere 15.7
1847 Female, age 91, left hemisphere 14.4
1794 Male, age 80, right hemisphere 14.3
2848 Male, age 76, right hemisphere 14.0
1841 Female, age 85, right hemisphere 13.5
Subiculum
nTPM: 18.6
2042 Male, age 76, both hemispheres 21.2
1901 Male, age 80, both hemispheres 19.2
2619 Male, age 74, both hemispheres 18.7
2438 Female, age 94, left hemisphere 18.2
2729 Female, age 91, right hemisphere 17.7
1977 Female, age 85, both hemispheres 16.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 20.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 20.4
Samples: 197

Max nTPM: 47.2
Min nTPM: 6.4
Std nTPM: 8.1
Median nTPM: 19.3
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 47.2
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 42.7
GTEX-17JCI-0011-R1b-SM-718A3 60-69 years, female 41.1
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 40.8
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 38.8
GTEX-13S7M-0011-R1b-SM-5PNZE 60-69 years, female 38.7
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 35.4
GTEX-14PJM-0011-R1a-SM-CNPO3 50-59 years, female 35.1
GTEX-1C6VR-0011-R1a-SM-7MXUE 60-69 years, male 34.7
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 34.3
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 34.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 14.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 14.0
FF:10153-102I9 76 years, female 18.6
FF:10169-103B7 60 years, female 9.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 5.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 4.5
Samples: 4

Max nTPM: 5.6
Min nTPM: 3.3
Sample A Female 3.3
Sample B Female 4.8
Sample C Male 4.2
Sample D Male 5.6
Entorhinal cortex
nTPM: 5.1
Samples: 4

Max nTPM: 5.4
Min nTPM: 4.7
Sample A Female 5.1
Sample B Female 4.7
Sample C Male 5.0
Sample D Male 5.4
Subiculum
nTPM: 5.8
Samples: 4

Max nTPM: 6.2
Min nTPM: 4.7
Sample A Female 6.2
Sample B Female 6.1
Sample C Male 6.2
Sample D Male 4.7
Ventral hippocampus
nTPM: 5.4
Samples: 4

Max nTPM: 6.2
Min nTPM: 4.4
Sample A Female 4.4
Sample B Female 6.0
Sample C Male 6.2
Sample D Male 4.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 5.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 5.9
Samples: 4

Max nTPM: 6.3
Min nTPM: 5.2
Sample A Male 5.9
Sample B Male 6.3
Sample C Female 6.3
Sample D Female 5.2
Hippocampal formation
nTPM: 5.4
Samples: 4

Max nTPM: 5.8
Min nTPM: 4.7
Sample A Male 5.8
Sample B Male 5.2
Sample C Female 4.7
Sample D Female 5.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
73636086 Antisense, RP_050913_03_G07, Mouse strain C57BL/6J (56 days, male) 0.0
71495897 Antisense, RP_050913_03_G07, Mouse strain C57BL/6J (56 days, male) 0.0

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