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HBA2
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  • HBA2
BRAIN PONS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Pons
PONS - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:260.6 nTPM
HPA:260.6 nTPM
FANTOM5:0.0 Scaled Tags Per Million

PONS - HPA Brain RNA-seq
Max nTPM 260.6
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 189.5
2301 Female, age 85, both hemispheres 235.4
2188 Female, age 91, both hemispheres 199.5
2090 Male, age 80, both hemispheres 197.8
1984 Male, age 76, both hemispheres 125.2
Dorsal cochlear nucleus
nTPM: 153.0
2378 Male, age 80, both hemispheres 209.3
2802 Male, age 74, right hemisphere 163.4
2187 Female, age 91, both hemispheres 160.7
2058 Male, age 76, both hemispheres 122.0
2370 Male, age 61, both hemispheres 109.9
Dorsal tegmental nucleus
nTPM: 195.8
2326 Male, age 74, both hemispheres 336.2
2358 Male, age 61, both hemispheres 164.0
1936 Male, age 76, left hemisphere 147.5
2083 Male, age 80, both hemispheres 135.6
Dorsolateral tegmental area
nTPM: 120.5
2751 Female, age 85, both hemispheres 195.5
2654 Male, age 80, both hemispheres 113.9
2360 Male, age 74, both hemispheres 109.3
2337 Male, age 61, both hemispheres 93.5
2141 Male, age 76, both hemispheres 90.2
Kolliker-Fuse nucleus
nTPM: 122.7
2315 Male, age 76, right hemisphere 172.3
2163 Male, age 80, both hemispheres 117.4
2793 Female, age 91, left hemisphere 78.5
Lateral lemniscal nuclei
nTPM: 100.0
2453 Male, age 74, right hemisphere 131.0
2169 Male, age 76, both hemispheres 114.4
2746 Female, age 85, left hemisphere 93.4
2320 Female, age 91, left hemisphere 84.6
2036 Male, age 80, both hemispheres 76.6
Lateral parabrachial nucleus
nTPM: 140.0
2792 Male, age 76, both hemispheres 234.6
2139 Female, age 85, right hemisphere 147.6
2013 Male, age 80, both hemispheres 118.5
2790 Male, age 61, both hemispheres 59.4
Lateral vestibular nucleus
nTPM: 160.9
2184 Male, age 76, both hemispheres 179.4
2311 Male, age 80, both hemispheres 142.4
Locus coeruleus
nTPM: 123.5
2720 Male, age 74, both hemispheres 303.5
2317 Female, age 72, unknown 138.9
2014 Male, age 55, unknown 116.9
2788 Male, age 74, unknown 108.5
2162 Male, age 80, both hemispheres 93.5
1980 Male, age 76, both hemispheres 60.8
2123 Female, age 91, both hemispheres 42.7
Medial olivary nucleus
nTPM: 108.8
2851 Male, age 80, both hemispheres 175.0
1962 Male, age 76, both hemispheres 137.4
2138 Female, age 91, both hemispheres 83.3
1943 Male, age 61, both hemispheres 39.6
Medial parabrachial nucleus
nTPM: 135.6
2786 Male, age 76, both hemispheres 183.1
2463 Female, age 85, right hemisphere 167.1
2170 Female, age 91, both hemispheres 134.9
2854 Male, age 80, both hemispheres 123.5
2156 Male, age 61, both hemispheres 69.5
Medial periolivary nuclei
nTPM: 130.5
2458 Female, age 91, both hemispheres 293.1
2063 Male, age 76, both hemispheres 108.9
2081 Male, age 80, both hemispheres 95.3
2791 Male, age 74, right hemisphere 79.8
2171 Female, age 85, both hemispheres 75.5
Motor facial nucleus
nTPM: 167.7
2795 Female, age 91, both hemispheres 258.2
2697 Female, age 85, both hemispheres 231.2
2327 Male, age 80, both hemispheres 176.3
2126 Male, age 61, both hemispheres 126.9
2062 Male, age 76, both hemispheres 122.0
2365 Male, age 74, right hemisphere 91.3
Motor trigeminal nucleus
nTPM: 147.7
2321 Female, age 91, both hemispheres 214.1
2309 Male, age 76, both hemispheres 182.1
2560 Male, age 74, both hemispheres 140.8
2079 Male, age 80, both hemispheres 125.1
2335 Male, age 61, both hemispheres 76.6
Nuclei of the trapezoid body
nTPM: 102.9
1983 Male, age 76, both hemispheres 155.3
2166 Male, age 80, both hemispheres 148.3
2368 Female, age 91, both hemispheres 107.8
2159 Male, age 61, both hemispheres 60.2
2735 Female, age 85, both hemispheres 43.1
Paramedian reticular nucleus
nTPM: 169.7
2050 Female, age 85, both hemispheres 360.5
2313 Male, age 61, both hemispheres 132.6
2057 Male, age 80, both hemispheres 100.3
2052 Male, age 76, both hemispheres 85.3
Pontine nuclei
nTPM: 110.5
2319 Female, age 91, both hemispheres 159.4
1968 Male, age 76, left hemisphere 146.0
1863 Male, age 55, unknown 112.0
2109 Female, age 72, unknown 110.7
2787 Female, age 85, both hemispheres 109.5
2454 Male, age 74, left hemisphere 107.9
2115 Male, age 80, left hemisphere 88.6
2727 Male, age 61, right hemisphere 49.5
Pontine raphe nucleus
nTPM: 141.9
2122 Female, age 85, midline 185.4
2853 Male, age 76, midline 98.4
Posteroventral cochlear nucleus
nTPM: 176.7
2752 Female, age 85, both hemispheres 328.0
2135 Female, age 91, both hemispheres 197.9
2341 Male, age 80, both hemispheres 143.0
2070 Male, age 76, both hemispheres 114.7
2371 Male, age 61, both hemispheres 99.9
Principal sensory trigeminal nucleus
nTPM: 112.1
2324 Male, age 76, both hemispheres 212.2
2367 Female, age 91, left hemisphere 91.5
2158 Male, age 61, both hemispheres 80.5
2008 Male, age 80, left hemisphere 63.9
Reticular pontine nucleus, caudal
nTPM: 211.1
2457 Female, age 91, both hemispheres 290.9
2559 Male, age 74, both hemispheres 289.5
2092 Male, age 76, both hemispheres 173.5
2332 Male, age 80, right hemisphere 90.8
Reticular pontine nucleus, oral
nTPM: 138.2
2366 Female, age 91, both hemispheres 232.5
2012 Female, age 85, both hemispheres 164.2
2167 Male, age 76, both hemispheres 125.6
1939 Male, age 80, both hemispheres 101.3
2361 Male, age 74, both hemispheres 67.5
Reticulotegmental nucleus
nTPM: 184.6
2452 Male, age 74, both hemispheres 266.4
2325 Male, age 76, both hemispheres 188.0
2322 Female, age 91, both hemispheres 148.9
2333 Male, age 80, both hemispheres 134.9
Spinal trigeminal nucleus, oral
nTPM: 260.6
1978 Male, age 76, both hemispheres 381.9
2164 Male, age 80, both hemispheres 253.6
2737 Female, age 85, both hemispheres 146.3
Subcoeruleus area
nTPM: 160.7
2451 Male, age 74, both hemispheres 233.0
2369 Female, age 85, left hemisphere 184.6
2089 Male, age 76, left hemisphere 163.4
1958 Male, age 80, both hemispheres 124.0
2323 Female, age 91, left hemisphere 98.5
Superior olive
nTPM: 148.7
2329 Male, age 80, right hemisphere 221.3
2020 Male, age 76, both hemispheres 203.4
2561 Female, age 91, both hemispheres 144.7
2364 Male, age 74, right hemisphere 122.7
1875 Female, age 85, both hemispheres 51.5
Superior vestibular nucleus
nTPM: 107.5
2383 Male, age 74, both hemispheres 133.0
2015 Male, age 80, both hemispheres 128.8
2061 Male, age 76, both hemispheres 60.7
Ventral periolivary nuclei
nTPM: 130.3
2794 Female, age 91, left hemisphere 234.9
2023 Male, age 76, both hemispheres 119.4
2165 Male, age 80, both hemispheres 111.7
2130 Female, age 85, both hemispheres 55.3
Ventrolateral tegmental area, A5 NE cell group
nTPM: 209.3
2161 Male, age 80, both hemispheres 435.1
2456 Female, age 91, both hemispheres 230.0
2359 Male, age 61, both hemispheres 220.7
1959 Male, age 76, both hemispheres 149.4
2449 Male, age 74, both hemispheres 114.0
2840 Female, age 85, both hemispheres 106.9

PONS - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 0
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 0.0
FF:10182-103D2 60 years, female 0.0
FF:10165-103B3 76 years, female 0.0
Pons
Scaled Tags Per Million: 0.0
FF:10033-101E6 18-54 years, mixed 0.0

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The Human Protein Atlas project is funded
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