We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
HBA2
SECTIONS
  • TISSUE
  • BRAIN
  • SINGLE CELL TYPE
  • TISSUE CELL TYPE
  • PATHOLOGY
  • DISEASE
  • IMMUNE CELL
  • BLOOD PROTEIN
  • SUBCELLULAR
  • CELL LINE
  • STRUCTURE
  • METABOLIC
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
  • SARS-COV-2
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Patient ID
Tissue
Category
Cluster
Reliability
Brain region
Category
Brain region
Category
Brain region
Category
Reliability
Cell type
Category
Cluster
Tissue
Cell type
Enrichment
Cancer
Prognosis
Cancer
Category
Cell type
Category
Cell lineage
Category
Cluster
Annotation
Disease
Location
Searches
Location
Cell line
Type
Phase
Reliability
Cancer type
Category
Cluster
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Protein structure
In atlas
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • TISSUE CELL

  • PATHOLOGY

  • DISEASE

  • IMMUNE

  • BLOOD

  • SUBCELL

  • CELL LINE

  • STRUCTURE

  • METABOLIC

  • HBA2
BRAIN SPINAL CORD Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
SPINAL CORD - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:316.4 nTPM
HPA:316.4 nTPM
GTEx:993.2 nTPM
FANTOM5:0.0 Scaled Tags Per Million

SPINAL CORD - HPA Brain RNA-seq
Max nTPM 316.4
Sample id Sample description nTPM
Cervical spinal cord, central gray
nTPM: 83.2
2565 Male, age 75, midline 114.7
1981 Female, age 72, midline 96.7
2816 Male, age 47, midline 76.2
2194 Female, age 79, both hemispheres 65.8
2048 Male, age 55, midline 62.6
Cervical spinal cord, dorsal horn
nTPM: 63.3
2297 Male, age 75, both hemispheres 88.3
2173 Female, age 72, unknown 84.7
2721 Male, age 90, both hemispheres 71.7
2296 Male, age 66, both hemispheres 50.4
1877 Male, age 55, unknown 45.5
2069 Male, age 47, both hemispheres 39.4
Cervical spinal cord, ventral horn
nTPM: 316.4
2098 Female, age 72, unknown 622.4
2480 Male, age 75, both hemispheres 526.3
2809 Male, age 90, both hemispheres 254.4
2820 Female, age 79, both hemispheres 196.0
2295 Male, age 66, both hemispheres 171.8
2068 Male, age 55, unknown 127.7

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 993.2
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 993.2
Samples: 159

Max nTPM: 6318.8
Min nTPM: 52.6
Std nTPM: 1106.7
Median nTPM: 664.0
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 6318.8
GTEX-NPJ8-0011-R9a-SM-2YUN5 40-49 years, male 6090.0
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 5287.8
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 4911.7
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 4446.1
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 4083.9
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 3920.4
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 3894.6
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 3389.0
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 2942.4
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 2657.4
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 2501.2
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 2399.7
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 2102.6
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 2068.5
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 2046.1
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 2007.7
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 1882.7
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 1814.3
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 1797.0
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 1756.6
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 1672.7
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 1652.5
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 1617.7
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 1592.4
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 1569.0
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 1560.9
GTEX-RU72-0011-R9A-SM-2TF67 50-59 years, female 1560.0
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 1522.8
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 1517.3
GTEX-Q2AG-0011-R9A-SM-2HMJ6 40-49 years, female 1466.1
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 1426.7
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 1370.5
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 1355.9
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 1341.6
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 1325.2
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 1314.0
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 1311.2
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 1302.6
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 1285.2
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 1277.2
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 1219.2
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 1202.3
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 1160.4
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 1148.2
GTEX-QVUS-0011-R9A-SM-3GIJA 60-69 years, female 1121.7
GTEX-NPJ7-0011-R9a-SM-2TC5R 60-69 years, female 1119.9
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 1115.6
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 1105.4
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 1102.9
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 1094.9
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 1060.8
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 1059.1
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 1041.6
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 1012.0
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 984.3
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 981.2
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 915.5
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 906.4
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 905.3
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 901.4
GTEX-1J1OQ-0011-R9b-SM-ARZMK 40-49 years, female 884.0
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 850.4
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 849.1
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 847.5
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 839.3
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 782.8
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 771.9
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 768.5
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 759.8
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 739.8
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 730.5
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 726.4
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 724.0
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 721.2
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 697.1
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 692.0
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 674.1
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 667.3
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 664.0
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 662.7
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 644.4
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 636.9
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 625.2
GTEX-R55E-0011-R9A-SM-2TC6C 20-29 years, male 624.5
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 604.4
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 596.5
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 554.3
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 537.2
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 534.0
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 528.3
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 526.7
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 518.0
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 497.9
GTEX-RNOR-0011-R9A-SM-2TF52 50-59 years, female 496.4
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 486.6
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 482.3
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 467.8
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 465.3
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 437.1
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 435.7
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 422.9
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 419.7
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 416.2
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 405.2
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 403.8
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 394.3
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 393.3
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 392.7
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 385.4
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 361.1
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 345.2
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 344.6
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 339.7
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 339.2
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 337.6
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 336.2
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 291.5
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 289.6
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 288.9
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 288.8
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 286.7
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 286.7
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 284.3
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 271.6
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 270.6
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 265.6
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 230.5
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 226.6
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 224.2
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 220.4
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 220.4
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 211.7
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 197.0
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 187.5
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 187.1
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 186.1
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 183.5
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 181.9
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 174.6
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 172.3
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 168.6
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 161.5
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 159.2
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 158.7
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 144.1
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 135.3
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 128.7
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 126.3
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 117.0
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 112.9
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 105.2
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 84.0
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 83.0
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 75.4
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 63.9
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 54.4
GTEX-18464-0011-R9a-SM-731BK 50-59 years, male 54.3
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 52.6
Show allShow less

SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 0
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 0.0
FF:10181-103D1 60 years, female 0.0
FF:10159-103A6 76 years, female 0.0

Contact

  • NEWS ARTICLES
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.