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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Low
Neuronal cells: Low
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:199.0 nTPM
FANTOM5:159.3 Scaled Tags Per Million
Pig:162.2 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA042123Antibody HPA048064Antibody CAB037314
Glial cells LowNot detectedNot detected
Neuronal cells HighNot detectedLow





CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 199.0
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 199.0
Samples: 246

Max nTPM: 424.2
Min nTPM: 125.8
Std nTPM: 38.3
Median nTPM: 194.3
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 424.2
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 366.7
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 343.5
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 336.4
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 331.2
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 315.3
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 310.2
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 271.5
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 267.9
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 267.2
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 262.4
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 261.7
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 261.6
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 259.6
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 249.1
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 248.5
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 248.3
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 245.0
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 244.8
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 242.9
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 242.2
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 241.5
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 241.2
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 241.1
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 240.6
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 239.9
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 239.6
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 238.6
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 236.0
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 235.3
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 233.0
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 232.9
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 232.3
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 230.9
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 229.7
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 229.2
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 228.6
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 228.5
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 226.8
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 226.5
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 226.4
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 225.8
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 225.6
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 225.4
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 224.9
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 223.9
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 223.4
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 223.0
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 222.6
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 222.6
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 220.4
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 220.3
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 219.8
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 219.3
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 218.5
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 217.2
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 216.9
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 216.4
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 216.3
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 215.6
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 215.4
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 215.1
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 214.9
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 214.7
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 214.0
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 212.9
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 212.6
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 212.1
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 211.6
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 211.2
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 210.5
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 210.3
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 210.1
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 209.9
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 209.7
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 209.7
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 208.4
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 207.4
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 207.1
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 206.8
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 206.1
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 205.7
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 205.5
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 204.5
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 204.4
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 204.0
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 204.0
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 203.8
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 203.2
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 202.7
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 202.7
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 202.1
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 202.0
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 201.8
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 201.7
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 201.6
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 201.6
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 201.1
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 200.8
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 200.4
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 200.4
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 199.8
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 199.6
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 198.6
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 198.3
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 198.3
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 197.9
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 197.8
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 197.8
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 197.5
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 197.4
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 197.0
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 196.8
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 196.5
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 196.5
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 195.9
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 195.9
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 195.8
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 195.5
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 195.1
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 195.1
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 194.6
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 194.5
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 194.2
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 193.9
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 193.9
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 193.3
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 193.2
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 192.3
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 192.1
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 191.8
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 191.4
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 191.2
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 191.1
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 191.0
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 190.8
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 190.4
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 190.1
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 189.6
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 189.1
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 188.6
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 188.3
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 188.1
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 187.3
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 187.1
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 187.0
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 187.0
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 186.4
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 185.9
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 185.8
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 185.7
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 185.4
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 185.4
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 185.4
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 185.4
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 184.9
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 184.5
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 184.3
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 184.1
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 183.9
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 183.8
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 183.4
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 183.1
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 182.9
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 182.7
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 182.6
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 182.5
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 181.9
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 181.7
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 181.7
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 181.6
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 180.8
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 180.6
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 179.5
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 179.4
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 179.1
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 178.9
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 178.9
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 178.3
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 178.1
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 177.9
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 177.4
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 177.4
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 177.3
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 176.5
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 176.3
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 175.3
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 175.1
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 174.6
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 174.3
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 173.9
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 173.8
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 173.1
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 172.4
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 172.3
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 172.0
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 171.9
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 171.8
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 171.3
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 171.2
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 170.7
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 170.1
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 170.0
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 169.8
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 169.0
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 168.8
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 168.8
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 168.5
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 168.1
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 167.7
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 167.3
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 167.1
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 166.7
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 166.7
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 163.6
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 163.3
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 163.2
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 163.1
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 161.5
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 160.6
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 160.3
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 159.8
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 159.1
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 159.0
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 157.9
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 155.4
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 154.8
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 153.7
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 152.7
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 151.5
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 150.9
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 150.8
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 149.6
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 149.4
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 148.7
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 148.1
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 147.2
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 145.0
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 142.2
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 142.1
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 141.2
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 140.6
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 128.9
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 128.0
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 127.1
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 125.8
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 159.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 159.3
FF:10164-103B2 76 years, female 159.3

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 162.2
Pig sample Sample description nTPM
Caudate
nTPM: 162.2
Samples: 4

Max nTPM: 177.0
Min nTPM: 146.1
Sample A Female 177.0
Sample B Female 146.1
Sample C Male 173.6
Sample D Male 152.2

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