HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:56.3 nTPM
HPA:56.3 nTPM
GTEx:94.4 nTPM
FANTOM5:90.5 Scaled Tags Per Million
Pig:30.1 nTPM
Mouse:24.2 nTPM
Allen mouse:0.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA044038
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 56.3
Sample id Sample description nTPM
Hippocampus
nTPM: 52.6
1898 Male, age 80, left hemisphere 60.8
2621 Female, age 67, right hemisphere 55.5
1855 Male, age 76, left hemisphere 53.6
2148 Female, age 91, left hemisphere 50.6
2529 Female, age 94, left hemisphere 48.1
1911 Female, age 85, right hemisphere 46.9
Dentate gyrus
nTPM: 51.7
1927 Female, age 91, both hemispheres 58.1
2530 Female, age 94, left hemisphere 54.8
2010 Male, age 76, both hemispheres 54.0
2246 Female, age 85, both hemispheres 48.9
2528 Male, age 74, both hemispheres 48.5
2531 Female, age 67, both hemispheres 45.8
Entorhinal gyrus
nTPM: 49.6
2613 Female, age 94, left hemisphere 53.9
2764 Male, age 80, right hemisphere 51.2
1938 Female, age 85, left hemisphere 50.7
1787 Male, age 76, left hemisphere 50.4
2686 Male, age 75, right hemisphere 46.9
2117 Female, age 91, right hemisphere 44.7
Hippocampus, CA1
nTPM: 55.5
2749 Male, age 80, left hemisphere 74.3
1873 Female, age 85, both hemispheres 55.6
2527 Male, age 74, both hemispheres 54.1
2082 Female, age 91, right hemisphere 50.4
2045 Male, age 76, both hemispheres 43.0
Hippocampus, CA2
nTPM: 54.0
1963 Male, age 80, left hemisphere 67.3
1892 Male, age 76, both hemispheres 61.4
2437 Female, age 94, left hemisphere 51.3
2249 Male, age 74, both hemispheres 49.1
1940 Female, age 85, left hemisphere 47.9
2113 Female, age 91, right hemisphere 47.3
Hippocampus, CA3
nTPM: 50.9
2137 Male, age 80, left hemisphere 63.4
2861 Female, age 67, both hemispheres 54.1
1867 Male, age 76, both hemispheres 50.9
1891 Female, age 85, both hemispheres 46.9
2436 Male, age 74, both hemispheres 45.5
2620 Female, age 94, left hemisphere 44.8
Parahippocampal cortex
nTPM: 50.6
1850 Male, age 80, both hemispheres 53.6
2245 Female, age 91, both hemispheres 53.4
2250 Female, age 67, right hemisphere 53.1
1933 Female, age 85, both hemispheres 52.0
1990 Female, age 91, right hemisphere 50.8
2693 Female, age 94, both hemispheres 50.4
2622 Female, age 67, right hemisphere 49.8
2018 Male, age 76, both hemispheres 48.8
2692 Male, age 74, both hemispheres 48.2
2532 Female, age 72, left hemisphere 45.9
Perirhinal gyrus
nTPM: 56.3
1847 Female, age 91, left hemisphere 63.8
1794 Male, age 80, right hemisphere 57.7
2521 Female, age 94, right hemisphere 56.2
1841 Female, age 85, right hemisphere 55.8
2848 Male, age 76, right hemisphere 48.1
Subiculum
nTPM: 47.7
1901 Male, age 80, both hemispheres 52.1
2619 Male, age 74, both hemispheres 49.9
1977 Female, age 85, both hemispheres 49.7
2729 Female, age 91, right hemisphere 46.4
2438 Female, age 94, left hemisphere 45.4
2042 Male, age 76, both hemispheres 42.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 94.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 94.4
Samples: 197

Max nTPM: 292.3
Min nTPM: 14.4
Std nTPM: 46.9
Median nTPM: 90.3
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 292.3
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 269.7
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 229.8
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 225.5
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 224.6
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 212.2
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 204.0
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 203.0
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 180.5
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 171.2
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 165.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 90.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 90.5
FF:10169-103B7 60 years, female 109.8
FF:10153-102I9 76 years, female 71.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 30.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 30.1
Samples: 4

Max nTPM: 36.3
Min nTPM: 22.9
Sample A Female 36.3
Sample B Female 32.5
Sample C Male 22.9
Sample D Male 28.7
Entorhinal cortex
nTPM: 28.9
Samples: 4

Max nTPM: 33.4
Min nTPM: 24.3
Sample A Female 27.4
Sample B Female 33.4
Sample C Male 30.4
Sample D Male 24.3
Subiculum
nTPM: 27.1
Samples: 4

Max nTPM: 37.1
Min nTPM: 20.7
Sample A Female 37.1
Sample B Female 25.8
Sample C Male 24.7
Sample D Male 20.7
Ventral hippocampus
nTPM: 27.4
Samples: 4

Max nTPM: 31.8
Min nTPM: 22.3
Sample A Female 22.3
Sample B Female 28.5
Sample C Male 26.8
Sample D Male 31.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 24.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 24.3
Samples: 4

Max nTPM: 24.8
Min nTPM: 23.3
Sample A Male 23.3
Sample B Male 24.8
Sample C Female 24.4
Sample D Female 24.5
Hippocampal formation
nTPM: 24.0
Samples: 4

Max nTPM: 29.2
Min nTPM: 19.5
Sample A Male 29.2
Sample B Male 24.6
Sample C Female 19.5
Sample D Female 22.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.3
70194600 Antisense, RP_050517_01_G01, Mouse strain C57BL/6J (56 days, male) 0.3

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