HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:233.1 nTPM
HPA:233.1 nTPM
GTEx:248.8 nTPM
FANTOM5:46.8 Scaled Tags Per Million
Pig:14.2 nTPM
Mouse:57.8 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA019592Antibody CAB025494
Glial cells HighMedium
Neuronal cells HighLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 233.1
Sample id Sample description nTPM
Hippocampus
nTPM: 232.8
1855 Male, age 76, left hemisphere 240.6
1898 Male, age 80, left hemisphere 236.5
2529 Female, age 94, left hemisphere 233.3
2148 Female, age 91, left hemisphere 232.9
1911 Female, age 85, right hemisphere 229.7
2621 Female, age 67, right hemisphere 224.0
Dentate gyrus
nTPM: 221.7
2010 Male, age 76, both hemispheres 233.3
2528 Male, age 74, both hemispheres 225.9
2246 Female, age 85, both hemispheres 222.3
1927 Female, age 91, both hemispheres 220.8
2530 Female, age 94, left hemisphere 215.0
2531 Female, age 67, both hemispheres 212.8
Entorhinal gyrus
nTPM: 227.8
1938 Female, age 85, left hemisphere 236.0
1787 Male, age 76, left hemisphere 233.5
2117 Female, age 91, right hemisphere 233.3
2764 Male, age 80, right hemisphere 226.9
2686 Male, age 75, right hemisphere 222.5
2613 Female, age 94, left hemisphere 214.4
Hippocampus, CA1
nTPM: 233.1
2527 Male, age 74, both hemispheres 241.7
2082 Female, age 91, right hemisphere 236.2
1873 Female, age 85, both hemispheres 233.2
2045 Male, age 76, both hemispheres 232.3
2749 Male, age 80, left hemisphere 222.0
Hippocampus, CA2
nTPM: 226.3
2113 Female, age 91, right hemisphere 233.4
1940 Female, age 85, left hemisphere 233.1
2249 Male, age 74, both hemispheres 231.5
1892 Male, age 76, both hemispheres 222.9
2437 Female, age 94, left hemisphere 218.9
1963 Male, age 80, left hemisphere 217.9
Hippocampus, CA3
nTPM: 224.1
2436 Male, age 74, both hemispheres 231.5
1891 Female, age 85, both hemispheres 228.4
1867 Male, age 76, both hemispheres 226.5
2137 Male, age 80, left hemisphere 224.0
2861 Female, age 67, both hemispheres 222.5
2620 Female, age 94, left hemisphere 211.5
Parahippocampal cortex
nTPM: 229.1
2018 Male, age 76, both hemispheres 246.2
1933 Female, age 85, both hemispheres 234.9
2250 Female, age 67, right hemisphere 231.6
2692 Male, age 74, both hemispheres 230.0
2622 Female, age 67, right hemisphere 228.3
1850 Male, age 80, both hemispheres 226.4
2245 Female, age 91, both hemispheres 226.1
1990 Female, age 91, right hemisphere 224.4
2693 Female, age 94, both hemispheres 223.6
2532 Female, age 72, left hemisphere 219.8
Perirhinal gyrus
nTPM: 227.1
1847 Female, age 91, left hemisphere 231.9
2521 Female, age 94, right hemisphere 230.4
1794 Male, age 80, right hemisphere 228.1
1841 Female, age 85, right hemisphere 224.4
2848 Male, age 76, right hemisphere 220.8
Subiculum
nTPM: 230.6
2619 Male, age 74, both hemispheres 242.6
2729 Female, age 91, right hemisphere 234.3
2042 Male, age 76, both hemispheres 232.5
1977 Female, age 85, both hemispheres 231.0
1901 Male, age 80, both hemispheres 223.7
2438 Female, age 94, left hemisphere 219.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 248.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 248.8
Samples: 197

Max nTPM: 786.1
Min nTPM: 57.8
Std nTPM: 116.8
Median nTPM: 227.8
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 786.1
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 686.1
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 627.2
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 567.6
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 524.6
GTEX-1GF9V-0011-R1a-SM-CKZNQ 60-69 years, male 517.8
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 513.7
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 487.1
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 465.4
GTEX-TSE9-0011-R1A-SM-3DB7E 60-69 years, female 460.2
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 458.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 46.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 46.8
FF:10169-103B7 60 years, female 48.1
FF:10153-102I9 76 years, female 45.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 14.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 14.2
Samples: 4

Max nTPM: 20.7
Min nTPM: 6.8
Sample A Female 17.6
Sample B Female 11.7
Sample C Male 20.7
Sample D Male 6.8
Entorhinal cortex
nTPM: 9.4
Samples: 4

Max nTPM: 13.1
Min nTPM: 6.4
Sample A Female 6.4
Sample B Female 13.1
Sample C Male 10.9
Sample D Male 7.3
Subiculum
nTPM: 12.3
Samples: 4

Max nTPM: 15.2
Min nTPM: 8.9
Sample A Female 15.2
Sample B Female 14.3
Sample C Male 10.9
Sample D Male 8.9
Ventral hippocampus
nTPM: 12.7
Samples: 4

Max nTPM: 15.9
Min nTPM: 9.2
Sample A Female 13.0
Sample B Female 12.5
Sample C Male 15.9
Sample D Male 9.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 57.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 54.9
Samples: 4

Max nTPM: 56.8
Min nTPM: 51.2
Sample A Male 55.6
Sample B Male 56.8
Sample C Female 55.9
Sample D Female 51.2
Hippocampal formation
nTPM: 57.9
Samples: 4

Max nTPM: 66.3
Min nTPM: 50.5
Sample A Male 66.3
Sample B Male 50.5
Sample C Female 61.8
Sample D Female 52.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
71735833 Antisense, RP_051010_03_C07, Mouse strain C57BL/6J (56 days, male) 0.0

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